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SEDLÁŘ, K. ŠKUTKOVÁ, H. PROVAZNÍK, I.
Original Title
Compressed DNA signal representation for classification of long sequences
Type
conference paper
Language
English
Original Abstract
The whole genome sequencing became standard part of nucleic acids' research due to the development of next-generation sequencing platforms. However, an algorithmic processing of long sequences is computationally demanding. We present a new method for lossy compression of DNA in a form of cumulative phase signals. This compression is convenient for comparison of various sequences in short time.
Keywords
cumulated phase, DNA, compression, long sequence
Authors
SEDLÁŘ, K.; ŠKUTKOVÁ, H.; PROVAZNÍK, I.
RIV year
2013
Released
29. 5. 2013
Publisher
LITERA BRNO
Location
Brno
ISBN
978-80-7375-757-1
Book
XIII pracovní setkání fyzikálních chemiků a elektrochemiků
Edition
1.
Edition number
Pages from
135
Pages to
136
Pages count
2
BibTex
@inproceedings{BUT101200, author="Karel {Sedlář} and Helena {Vítková} and Valentine {Provazník}", title="Compressed DNA signal representation for classification of long sequences", booktitle="XIII pracovní setkání fyzikálních chemiků a elektrochemiků", year="2013", series="1.", number="1.", pages="135--136", publisher="LITERA BRNO", address="Brno", isbn="978-80-7375-757-1" }