Publication detail

Pipeline for visualization of gene expression profiles of Clostridium beijerinckii NRRL B-598

JUREČKOVÁ, K. SEDLÁŘ, K. PROVAZNÍK, I.

Original Title

Pipeline for visualization of gene expression profiles of Clostridium beijerinckii NRRL B-598

Type

conference paper

Language

English

Original Abstract

Gene expression profiling is a key to understanding of the patterns of gene activity at the transcription level for example under different conditions. In specific cell it capture current state of genes’ activity and give us a picture of cellular function together with connections to genomic features. In this study, we present a pipeline for processing of transcriptomic RNA-Seq data of Clostridium beijerinckii NRRL B-598 and visualization of gene expression profiles by heatmaps.

Keywords

RNA-Seq; gene expression profile; heatmaps

Authors

JUREČKOVÁ, K.; SEDLÁŘ, K.; PROVAZNÍK, I.

Released

9. 9. 2019

Publisher

Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií

Location

Brno

ISBN

978-80-214-5781-2

Book

Proceedings of IEEE Student Branch Conference Mikulov 2019

Pages from

10

Pages to

12

Pages count

3

URL

http://www.radio.feec.vutbr.cz/ieee/userfiles/downloads/archive/2019-Mikulov/sbornik.pdf

BibTex

@inproceedings{BUT159005,
  author="Kateřina {Šabatová} and Karel {Sedlář} and Valentine {Provazník}",
  title="Pipeline for visualization of gene expression profiles of Clostridium beijerinckii NRRL B-598",
  booktitle="Proceedings of IEEE Student Branch Conference Mikulov 2019",
  year="2019",
  pages="10--12",
  publisher="Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií",
  address="Brno",
  isbn="978-80-214-5781-2",
  url="http://www.radio.feec.vutbr.cz/ieee/userfiles/downloads/archive/2019-Mikulov/sbornik.pdf"
}