Publication detail

Operon identifier: Identification of operon structures in the whole genome

NEJEZCHLEBOVÁ, J. SCHWARZEROVÁ, J.

Original Title

Operon identifier: Identification of operon structures in the whole genome

Type

conference paper

Language

English

Original Abstract

Currently, operon prediction is based on the distance of neighboring genes on the functional relationships of their products that encode proteins in a given nucleotide sequence, or on ORF distances. This study deals with the design of a new function that detects operon structures based on information from gene expression or alternatively in combination with previous information from current online available tools. The function was implemented in Python language and tested on Clostridium beijerinckii NRRL B-598. This bacterium has huge potential in biotechnology and research due to its fermentation product, butanol.

Keywords

Gene expression information, Transcription unit, Correlation coefficient, Clostridium beijerinckii

Authors

NEJEZCHLEBOVÁ, J.; SCHWARZEROVÁ, J.

Released

26. 4. 2022

Publisher

Brno University of Technology, Faculty of electrical engineering and communication

Location

Brno

ISBN

978-80-214-6030-0

Book

Proceedings II of the 28th Conference STUDENT EEICT 2022 Selected Papers

Edition number

1

Pages from

80

Pages to

83

Pages count

4

URL

https://www.eeict.cz/eeict_download/archiv/sborniky/EEICT_2022_sbornik_2_v3.pdf

BibTex

@inproceedings{BUT179427,
  author="Julie {Nejezchlebová} and Jana {Schwarzerová}",
  title="Operon identifier: Identification of operon structures in the whole genome",
  booktitle="Proceedings II of the 28th Conference STUDENT EEICT 2022 Selected Papers",
  year="2022",
  number="1",
  pages="80--83",
  publisher="Brno University of Technology, Faculty of electrical engineering and communication",
  address="Brno",
  isbn="978-80-214-6030-0",
  url="https://www.eeict.cz/eeict_download/archiv/sborniky/EEICT_2022_sbornik_2_v3.pdf"
}