Publication detail

Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms

VAIBAROVA, V. KRÁLOVÁ, S. PALÍKOVÁ, M. SCHWARZEROVÁ, J. NEJEZCHLEBOVÁ, J. ČEJKOVÁ, D. ČÍŽEK, A.

Original Title

Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms

Type

journal article in Web of Science

Language

English

Original Abstract

The salmonid pathogen Flavobacterium psychrophilum poses a significant economic threat to global aquaculture, yet our understanding of its genetic and phenotypic diversity remains incomplete across much of its geographic range. In this study, we characterise the genetic and phenotypic diversity of 70 isolates collected from rainbow trout (Oncorhynchus mykiss) and brown trout (Salmo trutta m. fario) from fish farms in the Czech Republic between 2012 and 2019 to compare their genomic content with all draft or complete genomes present in the NCBI database (n = 187).

Keywords

Flavobacterium psychrophilum, Genetic diversity, Antimicrobial resistance

Authors

VAIBAROVA, V.; KRÁLOVÁ, S.; PALÍKOVÁ, M.; SCHWARZEROVÁ, J.; NEJEZCHLEBOVÁ, J.; ČEJKOVÁ, D.; ČÍŽEK, A.

Released

18. 9. 2024

Publisher

BMC Microbiol

ISBN

1471-2180

Periodical

BMC MICROBIOLOGY

Year of study

24

Number

1

State

United Kingdom of Great Britain and Northern Ireland

Pages from

1

Pages to

15

Pages count

15

URL

https://bmcmicrobiol.biomedcentral.com/articles/10.1186/s12866-024-03490-3

BibTex

@article{BUT189681,
  author="Vera {Vaibarova} and Stanislava {Králová} and Miroslava {Palíková} and Jana {Schwarzerová} and Julie {Nejezchlebová} and Darina {Čejková} and Alois {Čížek}",
  title="Genetic and phenotypic diversity of Flavobacterium psychrophilum isolates from Czech salmonid fish farms",
  journal="BMC MICROBIOLOGY",
  year="2024",
  volume="24",
  number="1",
  pages="1--15",
  doi="10.1186/s12866-024-03490-3",
  issn="1471-2180",
  url="https://bmcmicrobiol.biomedcentral.com/articles/10.1186/s12866-024-03490-3"
}