Publication detail

Characterization of the Embryogenic Tissue of the Norway Spruce Including a Transition Layer between the Tissue and the Culture Medium by Magnetic Resonance Imaging

KOŘÍNEK, R. MIKULKA, J. HŘIB, J. HUDEC, J. HAVEL, L. BARTUŠEK, K.

Original Title

Characterization of the Embryogenic Tissue of the Norway Spruce Including a Transition Layer between the Tissue and the Culture Medium by Magnetic Resonance Imaging

Type

journal article in Web of Science

Language

English

Original Abstract

The paper describes the visualization of the cells (ESEs) and mucilage (ECMSN) in an embryogenic tissue via magnetic resonance imaging (MRI) relaxometry measurement combined with the subsequent multi-parametric segmentation. The computed relaxometry maps T1 and T2 show a thin layer (transition layer) between the culture medium and the embryogenic tissue. The ESEs, mucilage, and transition layer differ in their relaxation times T1 and T2; thus, these times can be used to characterize the individual parts within the embryogenic tissue. The observed mean values of the relaxation times T1 and T2 of the ESEs, mucilage, and transition layer are as follows: 1469 ± 324 and 53 ± 10 ms, 1784 ± 124 and 74 ± 8 ms, 929 ± 164 and 32 ± 4.7 ms, respectively. The multi-parametric segmentation exploiting the T1 and T2 relaxation times as a classifier shows the distribution of the ESEs and mucilage within the embryogenic tissue. The discussed T1 and T2 indicators can be utilized to characterize both the growth-related changes in an embryogenic tissue and the effect of biotic/abiotic stresses, thus potentially becoming a distinctive indicator of the state of any examined embryogenic tissue.

Keywords

Norway spruce, ESEs, mucilage, transition layer, MRI relaxometry

Authors

KOŘÍNEK, R.; MIKULKA, J.; HŘIB, J.; HUDEC, J.; HAVEL, L.; BARTUŠEK, K.

Released

25. 2. 2017

Publisher

De Gruyter Open

ISBN

1335-8871

Periodical

Measurement Science Review

Year of study

17

Number

1

State

Slovak Republic

Pages from

19

Pages to

26

Pages count

8

URL

http://www.degruyter.com/view/j/msr.2017.17.issue-1/msr-2017-0003/msr-2017-0003.xml?format=INT

Full text in the Digital Library

http://hdl.handle.net/11012/63810

BibTex

@article{BUT133010,
  author="Radim {Kořínek} and Jan {Mikulka} and Jiří {Hřib} and Jiří {Hudec} and Ladislav {Havel} and Karel {Bartušek}",
  title="Characterization of the Embryogenic Tissue of the Norway Spruce Including a Transition Layer between the Tissue and the Culture Medium by Magnetic Resonance Imaging",
  journal="Measurement Science Review",
  year="2017",
  volume="17",
  number="1",
  pages="19--26",
  doi="10.1515/msr-2017-0003",
  issn="1335-8871",
  url="http://www.degruyter.com/view/j/msr.2017.17.issue-1/msr-2017-0003/msr-2017-0003.xml?format=INT"
}