Publication detail

Influence of sample variance on the phylogenetic reconstruction of protein sequences

ŠKUTKOVÁ, H. PROVAZNÍK, I. KIZEK, R.

Original Title

Influence of sample variance on the phylogenetic reconstruction of protein sequences

Type

conference paper

Language

English

Original Abstract

This study deals with the influence of sample variance of evolutionary distance estimation on phylogeny reconstruction of protein sequences. We modified the currently used methods by more precise calculation of the sample variance depending on the type of sequences and the used evolutionary model to eliminate this influence.

Keywords

Phylogenetic tree; sample variance; evolutionary distance; pair-wise distance; Jukes-Cantor; Neighbor-Joining; BIONJ; protein sequences

Authors

ŠKUTKOVÁ, H.; PROVAZNÍK, I.; KIZEK, R.

RIV year

2011

Released

26. 10. 2011

ISBN

978-1-4503-0913-4

Book

ACM digital library: Proceedings of 4th International Symposium on Applied Sciences in Biomedical and Communication Technologies

Pages from

1

Pages to

5

Pages count

5

BibTex

@inproceedings{BUT73998,
  author="Helena {Vítková} and Valentine {Provazník} and René {Kizek}",
  title="Influence of sample variance on the phylogenetic reconstruction of protein sequences",
  booktitle="ACM digital library: Proceedings of 4th International Symposium on Applied Sciences in Biomedical and Communication Technologies",
  year="2011",
  pages="1--5",
  isbn="978-1-4503-0913-4"
}