Publication detail

Constructing Phylogenetic Trees Based on Intra-Group Analysis of Human Mitochondrial DNA

VOGEL, I. ZEDEK, F. OČENÁŠEK, P.

Original Title

Constructing Phylogenetic Trees Based on Intra-Group Analysis of Human Mitochondrial DNA

Type

conference paper

Language

English

Original Abstract

This paper describes a modified algorithm for inferring phylogenetic trees based on distance techniques. The input of the algorithm consists of predefined clusters of data. It uses a usual agglomerative approach, however it involves a novel technique for distance matrix creation as the task of clustering predefined groups of human mitochondrial DNA sequences should be fulfilled.

Keywords

intra-group analysis, substitution model, position-specific clustering vector, mtDNA, population divergence, phylogenetic tree, neighbor joining

Authors

VOGEL, I.; ZEDEK, F.; OČENÁŠEK, P.

RIV year

2011

Released

19. 7. 2011

Publisher

Springer Verlag

Location

Berlin Heidelberg

ISBN

978-3-642-21792-0

Book

Human Interface and the Management of Information. Interacting with Information

Edition

Lecture Notes in Computer Science

ISBN

0302-9743

Periodical

Lecture Notes in Computer Science

Year of study

6771

Number

1

State

Federal Republic of Germany

Pages from

165

Pages to

169

Pages count

5

BibTex

@inproceedings{BUT76261,
  author="Ivan {Vogel} and František {Zedek} and Pavel {Očenášek}",
  title="Constructing Phylogenetic Trees Based on Intra-Group Analysis of Human Mitochondrial DNA",
  booktitle="Human Interface and the Management of Information. Interacting with Information",
  year="2011",
  series="Lecture Notes in Computer Science",
  journal="Lecture Notes in Computer Science",
  volume="6771",
  number="1",
  pages="165--169",
  publisher="Springer Verlag",
  address="Berlin Heidelberg",
  doi="10.1007/978-3-642-21793-7\{_}20",
  isbn="978-3-642-21792-0",
  issn="0302-9743"
}