Course detail

Modern approaches of biomedical image analysis

FEKT-DBT4Acad. year: 2018/2019

The course focuses on the issue of registration ( alignment ) image data with examples of applications especially in medicine and related fusion image information. The basic methods and components of mono- and multi - modal registration with a variety of rigid and flexible registration are discussed. Students will deepen their knowledge in the field of texture analysis of image data including the issue of invariance texture features .

Language of instruction

Czech

Number of ECTS credits

4

Mode of study

Not applicable.

Guarantor

doc. Ing. Radim Kolář, Ph.D.

Department

Department of Biomedical Engineering (UBMI)

Learning outcomes of the course unit

Not applicable.

Prerequisites

Not applicable.

Co-requisites

Not applicable.

Planned learning activities and teaching methods

Techning methods include seminars. Course is taking advantage of e-learning (Moodle) system. Students have to write a single project during the course.

Assesment methods and criteria linked to learning outcomes

Not applicable.

Course curriculum

1. Principles of registration ( alignment ) medical image data.
2. Fusion of image information.
3. Basic methods and components mono- and multi - modal registration .
4. Geometric transformations.
5. Metrics for registration.
6. Interpolation techniques.
7. Optimization approaches.
8. Overview of methods of texture analysis .
9. Problems of feature invariance.
10. Markov random fields texture models.
11. Methods of local binary patterns.
12. Methods based on higher-order statistics .

Work placements

Not applicable.

Aims

The aim of the course is to provide an overview of the two current topics in the field of image processing - image registration and texture analysis of image data.

Specification of controlled education, way of implementation and compensation for absences

Not applicable.

Recommended optional programme components

Not applicable.

Prerequisites and corequisites

Not applicable.

Basic literature

Hajnal, J.V., Hill, D.L.G., Hawkes, D.J.: Medical Image Registration, CRC Press, 2001
M. Petrou, Sevilla, P.G. Dealing with Texture, Wiley, 2006

Recommended reading

Not applicable.

Classification of course in study plans

  • Programme BTB-PK Doctoral

    branch PK-BTB , 1 year of study, winter semester, elective specialised

  • Programme BTB-PP Doctoral

    branch PP-BTB , 1 year of study, winter semester, elective specialised

Type of course unit

 

Seminar

39 hod., optionally

Teacher / Lecturer

doc. Ing. Radim Kolář, Ph.D.