Detail publikace

Operon identifier: Identification of operon structures in the whole genome

NEJEZCHLEBOVÁ, J. SCHWARZEROVÁ, J.

Originální název

Operon identifier: Identification of operon structures in the whole genome

Typ

článek ve sborníku ve WoS nebo Scopus

Jazyk

angličtina

Originální abstrakt

Currently, operon prediction is based on the distance of neighboring genes on the functional relationships of their products that encode proteins in a given nucleotide sequence, or on ORF distances. This study deals with the design of a new function that detects operon structures based on information from gene expression or alternatively in combination with previous information from current online available tools. The function was implemented in Python language and tested on Clostridium beijerinckii NRRL B-598. This bacterium has huge potential in biotechnology and research due to its fermentation product, butanol.

Klíčová slova

Gene expression information, Transcription unit, Correlation coefficient, Clostridium beijerinckii

Autoři

NEJEZCHLEBOVÁ, J.; SCHWARZEROVÁ, J.

Vydáno

26. 4. 2022

Nakladatel

Brno University of Technology, Faculty of electrical engineering and communication

Místo

Brno

ISBN

978-80-214-6030-0

Kniha

Proceedings II of the 28th Conference STUDENT EEICT 2022 Selected Papers

Číslo edice

1

Strany od

80

Strany do

83

Strany počet

4

URL

https://www.eeict.cz/eeict_download/archiv/sborniky/EEICT_2022_sbornik_2_v3.pdf

BibTex

@inproceedings{BUT179427,
  author="Julie {Nejezchlebová} and Jana {Schwarzerová}",
  title="Operon identifier: Identification of operon structures in the whole genome",
  booktitle="Proceedings II of the 28th Conference STUDENT EEICT 2022 Selected Papers",
  year="2022",
  number="1",
  pages="80--83",
  publisher="Brno University of Technology, Faculty of electrical engineering and communication",
  address="Brno",
  isbn="978-80-214-6030-0",
  url="https://www.eeict.cz/eeict_download/archiv/sborniky/EEICT_2022_sbornik_2_v3.pdf"
}