Detail publikace

Topological entropy calculations on the molecular sequences

SARKAR, A. SARKAR, B. ZMEŠKAL, O.

Originální název

Topological entropy calculations on the molecular sequences

Typ

článek v časopise ve Scopus, Jsc

Jazyk

angličtina

Originální abstrakt

We worked on the energy contained in the molecules arranged in genetic molecular sequence. The binding energy of the genetic alphabet, i.e., A, C, G, T have been taken from experimental data and they are used in the calculation of the entropy along the sequence. This is termed as topological entropy on the molecular sequence. The topological entropy of various species is used for principal component analysis, which is a tool to reduce the multidimensional data to less dimension for data visualization. Further the output of the analysis is used for the determination of dissimilarity between the sequences. The technique is verified using HEV molecular sequences.

Klíčová slova

topological entropy, HEV molecular sequences, calculations

Autoři

SARKAR, A.; SARKAR, B.; ZMEŠKAL, O.

Vydáno

12. 9. 2023

Nakladatel

AIP publishing

ISSN

0094-243X

Periodikum

AIP conference proceedings

Ročník

2894

Číslo

020017

Stát

Spojené státy americké

Strany od

020017-1

Strany do

020017-11

Strany počet

11

URL