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SEDLÁŘ, K.
Originální název
Signal Based Feature Selection for Fast Classification of Sequences in Metagenomics
Typ
článek ve sborníku ve WoS nebo Scopus
Jazyk
angličtina
Originální abstrakt
The rapid development in DNA sequencing techniques brings completely new possibilities into metagenomics research. No longer is the whole metagenome sequencing an issue. On the other hand, this progress lies new demands on bioinformatics tools indented to process this kind of data. Unlike the amplicon based sequencing where every sequence represents a particular gene, the whole metagenome sequencing produce sequences that are random pieces of genomes in the metagenome. Therefore, the reference database for identification of these sequences cannot be used. Here, we present fast feature selection based on genomic signal processing for alignment-free classification of sequences in the metagenome.
Klíčová slova
metagenomics, WGS, genomic signal
Autoři
Vydáno
28. 4. 2016
Nakladatel
Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních
Místo
Brno
ISBN
978-80-214-5350-0
Kniha
Proceedings of the 22nd Conference STUDENT EEICT 2016
Strany od
558
Strany do
562
Strany počet
5
BibTex
@inproceedings{BUT124581, author="Karel {Sedlář}", title="Signal Based Feature Selection for Fast Classification of Sequences in Metagenomics", booktitle="Proceedings of the 22nd Conference STUDENT EEICT 2016", year="2016", pages="558--562", publisher="Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních", address="Brno", isbn="978-80-214-5350-0" }