Detail publikace

Computational molecular evolution - from mathematical models to novel distance metric based on intra-group analysis

VOGEL, I. OČENÁŠEK, P. ZEDEK, F.

Originální název

Computational molecular evolution - from mathematical models to novel distance metric based on intra-group analysis

Typ

článek ve sborníku mimo WoS a Scopus

Jazyk

angličtina

Originální abstrakt

In the proposed paper we analyse and discuss the molecular evolution from the point of view of mathematical analysis and statistics. Some characteristics of distance-based algorithms for phylogenetic inference are depicted. We furthermore use knowledge of mathematical models to design a modified algorithm for phylogenetic tree reconstruction. We implement the presented methods in the form of a simple phylogenetic library, briefly report about results of our case study and finally show a way for building a web interface for biological purposes through Mobyle portal. Finally, we draw a conclusion and discuss possible future work on the project.

Klíčová slova

phylogeny, intra-group analysis, substitution model, Markov chains

Autoři

VOGEL, I.; OČENÁŠEK, P.; ZEDEK, F.

Rok RIV

2011

Vydáno

5. 4. 2011

Nakladatel

Brno University of Technology

Místo

Brno

ISBN

978-80-214-4303-7

Kniha

EDS '11 IMAPS CS International Conference Proceedings

Strany od

264

Strany do

269

Strany počet

6

BibTex

@inproceedings{BUT76292,
  author="Ivan {Vogel} and Pavel {Očenášek} and František {Zedek}",
  title="Computational molecular evolution - from mathematical models to novel distance metric based on intra-group analysis",
  booktitle="EDS '11 IMAPS CS International Conference Proceedings",
  year="2011",
  pages="264--269",
  publisher="Brno University of Technology",
  address="Brno",
  isbn="978-80-214-4303-7"
}