Publication detail

Classification of species to higher taxa based on analysis of DNA barcodes - a bird example

MADĚRÁNKOVÁ, D. PROVAZNÍK, I.

Original Title

Classification of species to higher taxa based on analysis of DNA barcodes - a bird example

Type

conference paper

Language

English

Original Abstract

DNA barcoding based on mitochondrial gene analysis is a modern method for species identification. We tested three variations of a novel method for species classifica-tion into families and orders based on the nucleotide density of the mtDNA barcode. We verified the methods on datasets of bird barcode sequences. The reference database of species families was created from South American bird species. North American, European, and Asian birds of the same families but mostly different species were classified effectively nearly 88.13 percent into families and 99.51 percent into orders in best case for the third variation of the method.

Keywords

DNA barcode, species classification

Authors

MADĚRÁNKOVÁ, D.; PROVAZNÍK, I.

RIV year

2013

Released

10. 6. 2013

Location

Tampere

ISBN

978-952-15-3092-0

Book

The 10th International Workshop on Computational Systems Biology

Pages from

75

Pages to

79

Pages count

5

BibTex

@inproceedings{BUT101868,
  author="Denisa {Maděránková} and Valentine {Provazník}",
  title="Classification of species to higher taxa based on analysis of DNA barcodes - a bird example",
  booktitle="The 10th International Workshop on Computational Systems Biology",
  year="2013",
  pages="75--79",
  address="Tampere",
  isbn="978-952-15-3092-0"
}