Detail publikace

Classification of species to higher taxa based on analysis of DNA barcodes - a bird example

MADĚRÁNKOVÁ, D. PROVAZNÍK, I.

Originální název

Classification of species to higher taxa based on analysis of DNA barcodes - a bird example

Typ

článek ve sborníku ve WoS nebo Scopus

Jazyk

angličtina

Originální abstrakt

DNA barcoding based on mitochondrial gene analysis is a modern method for species identification. We tested three variations of a novel method for species classifica-tion into families and orders based on the nucleotide density of the mtDNA barcode. We verified the methods on datasets of bird barcode sequences. The reference database of species families was created from South American bird species. North American, European, and Asian birds of the same families but mostly different species were classified effectively nearly 88.13 percent into families and 99.51 percent into orders in best case for the third variation of the method.

Klíčová slova

DNA barcode, species classification

Autoři

MADĚRÁNKOVÁ, D.; PROVAZNÍK, I.

Rok RIV

2013

Vydáno

10. 6. 2013

Místo

Tampere

ISBN

978-952-15-3092-0

Kniha

The 10th International Workshop on Computational Systems Biology

Strany od

75

Strany do

79

Strany počet

5

BibTex

@inproceedings{BUT101868,
  author="Denisa {Maděránková} and Valentine {Provazník}",
  title="Classification of species to higher taxa based on analysis of DNA barcodes - a bird example",
  booktitle="The 10th International Workshop on Computational Systems Biology",
  year="2013",
  pages="75--79",
  address="Tampere",
  isbn="978-952-15-3092-0"
}