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ŠKUTKOVÁ, H. PROVAZNÍK, I. KIZEK, R.
Originální název
Relationships Of Bacterial Metallothioneins Analyses: Phylogenetic Tree Construction Method
Typ
článek ve sborníku ve WoS nebo Scopus
Jazyk
angličtina
Originální abstrakt
Phylogenetics is a central discipline in the modern life sciences aimed at describing sequences similarity through evolutionary relationships among organisms. Although it may seem that the graphical representation of phylogenetic connection between organism is a mastered problem, the results always depend on correct choice of method of computation, especially for diverse data as sequences of bacterial metallothioneins. We shown how our used methods and algorithms in a suitable form gives a good results. The coupling a simple Jukes Cantor model with approximation to Poisson distribution for amino acids and BioNJ algorithm witch is more effectively for alignment sequences, we obtained the resulting tree structure forms closed units, which corresponds to their affinity.
Klíčová slova
phylogentic tree, neigbour-joining, BIONJ, Jukes-Cantor, metallothionein
Autoři
ŠKUTKOVÁ, H.; PROVAZNÍK, I.; KIZEK, R.
Rok RIV
2010
Vydáno
30. 6. 2010
Nakladatel
VUT v Brně
Místo
Brno
ISBN
978-80-214-4106-4
Kniha
Analysis of Biomedical Signals and Images
Číslo edice
20
ISSN
1211-412X
Periodikum
Ročník
12
Stát
Česká republika
Strany od
1
Strany do
6
Strany počet
BibTex
@inproceedings{BUT35864, author="Helena {Vítková} and Valentine {Provazník} and René {Kizek}", title="Relationships Of Bacterial Metallothioneins Analyses: Phylogenetic Tree Construction Method", booktitle="Analysis of Biomedical Signals and Images", year="2010", journal="Analysis of Biomedical Signals and Images", volume="12", number="20", pages="1--6", publisher="VUT v Brně", address="Brno", isbn="978-80-214-4106-4", issn="1211-412X" }