doc. Ing.

Radim Kolář

Ph.D.

FEEC, UBMI – Head of Department

+420 54114 6668
kolarr@vut.cz

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doc. Ing. Radim Kolář, Ph.D.

Publications

  • 2023

    VIČAR, T.; JAKUBÍČEK, R.; CHMELÍK, J.; KOLÁŘ, R. Registration of medical image sequences using auto-differentiation. In Medical Imaging and Computer-Aided Diagnosis: Proceedings of 2022 International Conference on Medical Imaging and Computer-Aided Diagnosis (MICAD 2022). Lecture notes in Electrical Engineering. 1. Springer, 2023. p. 169-178. ISBN: 978-981-16-6774-9. ISSN: 1876-1100.
    Detail | WWW

    VALTEROVÁ, E.; UNTERLAUFT, J.; FRANCKE, M.; TORALF, K.; KOLÁŘ, R.; RAUSCHER, F. Comprehensive automatic processing and analysis of adaptive optics flood illumination retinal images on healthy subjects. Biomedical Optics Express, 2023, vol. 14, no. 2, p. 945-970. ISSN: 2156-7085.
    Detail | WWW | Full text in the Digital Library

    NOHEL, M.; KOLÁŘ, R. Segmentation of optic disc and cup in retinal images using of deep learning approaches. Proceedings I of the 29th Conference STUDENT EEICT 2023. 1st edition. Brno, Czech Republic: Brno University of Technology, Faculty of Electrical Engineering and Communication, 2023. p. 265-269. ISBN: 978-80-214-6153-6.
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    KOLÁŘ, R.; VIČAR, T.; CHMELÍK, J.; JAKUBÍČEK, R.; ODSTRČILÍK, J.; VALTEROVÁ, E.; NOHEL, M.; SKORKOVSKÁ, K.; TORNOW, R. Assessment of retinal vein pulsation through video-ophthalmoscopy and simultaneous biosignals acquisition. Biomedical Optics Express, 2023, vol. 14, no. 6, p. 2645-2657. ISSN: 2156-7085.
    Detail | WWW | Full text in the Digital Library

    ODSTRČILÍK, J.; KOLÁŘ, R.; HORN, F.; TORNOW, R. Comparative analysis of retinal photoplethysmographic spatial maps and thickness of retinal nerve fiber layer. PLOS ONE, 2023, vol. 18, no. 5, p. 1-15. ISSN: 1932-6203.
    Detail | WWW | Full text in the Digital Library

    TORNOW, R.; ODSTRČILÍK, J.; KOLÁŘ, R. A multi-color video-ophthalmoscopes allows to measure the spectral distribution of light absorption of blood in the human retina. Frontiers in Medicine, 2023, vol. 10, no. 1, p. 1-6. ISSN: 2296-858X.
    Detail | WWW | Full text in the Digital Library

  • 2022

    NOHEL, M.; KOLÁŘ, R. Detection of optic disc in retinal fundus image. In Proceedings I of the 28th Conference STUDENT EEICT 2022 General Papers. 1. Brno: Brno University of Technology, Faculty of Electrical Engineering and Communication, 2022. p. 239-242. ISBN: 978-80-214-6029-4.
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    KOLÁŘ, R.; VIČAR, T.; ODSTRČILÍK, J.; VALTEROVÁ, E.; KRÁLÍK, M.; TORNOW, R. Multispectral retinal video-ophthalmoscope with fiber optic illumination. Journal of Biophotonics, 2022, vol. 15, no. 9, ISSN: 1864-0648.
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    VIČAR, T.; CHMELÍK, J.; NAVRÁTIL, J.; KOLÁŘ, R.; CHMELÍKOVÁ, L.; ČMIEL, V.; JAGOŠ, J.; PROVAZNÍK, I.; MASAŘÍK, M.; GUMULEC, J. Cancer cell viscoelasticity measurement by quantitative phase and flow stress induction. BIOPHYSICAL JOURNAL, 2022, vol. 121, no. 9, p. 1632-1642. ISSN: 0006-3495.
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    LABOUNKOVÁ, I.; LABOUNEK, R.; KOLÁŘ, R.; TORNOW, R.; BABBS, C.; MCCLELLAND, C.; MILLER, B.; NESTRAŠIL, I. Heart rate and age modulate retinal pulsatile patterns. Communications Biology, 2022, vol. 5, no. 1, p. 1-10. ISSN: 2399-3642.
    Detail | WWW | Full text in the Digital Library

    PAŠTĚKA, R.; SCHÖLLBAUER, L.; SANTOS, P.; KOLÁŘ, R.; FORJAN, M. Experimental Evaluation of Dry Powder Inhalers during Inhalation and Exhalation Using a Model of the Human Respiratory System (xPULM™). Pharmaceutics, 2022, vol. 14, no. 3, p. 1-15. ISSN: 1999-4923.
    Detail | WWW | Full text in the Digital Library

  • 2021

    NĚMCOVÁ, A.; SVOZILOVÁ, V.; BUCSUHÁZY, K.; SMÍŠEK, R.; MÉZL, M.; HESKO, B.; BELÁK, M.; BILÍK, M.; MAXERA, P.; SEITL, M.; DOMINIK, T.; SEMELA, M.; ŠUCHA, M.; KOLÁŘ, R. Multimodal Features for Detection of Driver Stress and Fatigue: Review. IEEE TRANSACTIONS ON INTELLIGENT TRANSPORTATION SYSTEMS, 2021, vol. 22, no. 6, p. 3214-3233. ISSN: 1558-0016.
    Detail | WWW | Full text in the Digital Library

    VIČAR, T.; CHMELÍK, J.; JAKUBÍČEK, R.; CHMELÍKOVÁ, L.; GUMULEC, J.; BALVAN, J.; PROVAZNÍK, I.; KOLÁŘ, R. Self-supervised pretraining for transferable quantitative phase image cell segmentation. Biomedical Optics Express, 2021, vol. 12, no. 10, p. 6514-6528. ISSN: 2156-7085.
    Detail | WWW | Full text in the Digital Library

    VIČAR, T.; GUMULEC, J.; KOLÁŘ, R.; KOPEČNÁ, O.; PAGÁČOVÁ, E.; FALKOVÁ, I.; FALK, M. DeepFoci: Deep Learning-Based Algorithm for Fast Automatic Analysis of DNA Double-Strand Break Ionizing Radiation-Induced Foci. Computational and Structural Biotechnology Journal, 2021, vol. 19, no. 1, p. 1-16. ISSN: 2001-0370.
    Detail | WWW | Full text in the Digital Library

    KOLÁŘ, R.; ODSTRČILÍK, J.; TORNOW, R. Photoplethysmographic analysis of retinal videodata based on the Fourier domain approach. Biomedical Optics Express, 2021, vol. 12, no. 12, p. 7405-7421. ISSN: 2156-7085.
    Detail | WWW | Full text in the Digital Library

    LABOUNKOVÁ, I.; LABOUNEK, R.; NESTRAŠIL, I.; ODSTRČILÍK, J.; TORNOW, R.; KOLÁŘ, R. Blind Source Separation of Retinal Pulsatile Patterns in Optic Nerve Head Video-Recordings. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2021, vol. 40, no. 3, p. 852-864. ISSN: 0278-0062.
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    KOLÁŘ, R.; VIČAR, T.; CHMELÍKOVÁ, L.; PROVAZNÍK, I. Increasing the Image Contrast via Fast Fluorescence Photobleaching. In 2021 43nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC). Elsevier, 2021. p. 2741-2744. ISBN: 978-1-7281-1179-7.
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    VALTEROVÁ, E.; RAUSCHER, F.G..; KOLÁŘ, R. Robust Automatic Montaging of Adaptive Optics Flood Illumination Retinal Images. In Annual Conference on Medical Image Understanding and Analysis. Lecture Notes in Computer Science. Oxford, Great Britain: Springer, Cham., 2021. p. 503-513. ISBN: 978-3-030-80432-9. ISSN: 0302-9743.
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    PAŠTĚKA, R.; SANTOS, P.; BARROS, N.; KOLÁŘ, R.; FORJAN, M. Patient-Ventilator Interaction Testing Using the Electromechanical Lung Simulator xPULM (TM) during V/A-C and PSV Ventilation Mode. Applied Sciences - Basel, 2021, vol. 11, no. 9, p. 1-14. ISSN: 2076-3417.
    Detail | WWW | Full text in the Digital Library

    VIČAR, T.; GUMULEC, J.; KOLÁŘ, R.; CHMELÍK, J.; NAVRATIL, J.; CHMELÍKOVÁ, L.; ČMIEL, V.; PROVAZNÍK, I.; MASAŘÍK, M. Parametric Deconvolution for Cancer Cells Viscoelasticity Measurements from Quantitative Phase Images. In IEEE Engineering in Medicine and Biology Society Conference Proceedings. Proceedings IEEE EMBC. 345 E 47TH ST, NEW YORK, NY 10017 USA: IEEE, 2021. p. 439-442. ISBN: 978-1-7281-1179-7. ISSN: 1557-170X.
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  • 2020

    VIČAR, T.; CHMELÍK, J.; KOLÁŘ, R. Cell Segmentation in Quantitative Phase Images with Improved Iterative Thresholding Method. In EMBEC 2020, IFMBE Proceedings vol. 80. IFMBE PROCEEDINGS. Switzerland: Springer Nature Switzerland AG 2021, 2020. p. 233-239. ISBN: 978-3-030-64609-7. ISSN: 1680-0737.
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    REPČÍK, T.; POLÁKOVÁ, V.; WALOSZEK, V.; NOHEL, M.; SMITAL, L.; VÍTEK, M.; KOLÁŘ, R. Biometric Authentication Using the Unique Characteristics of the ECG Signal. In Computing in Cardiology 2020. Computing in Cardiology. Rimini, Italy: IEEE, 2020. p. 1-4. ISSN: 2325-887X.
    Detail | WWW | Full text in the Digital Library

    TORNOW, R.; KOLÁŘ, R.; ODSTRČILÍK, J.; LABOUNKOVÁ, I.; HORN, F. Imaging video plethysmography shows reduced signal amplitude in glaucoma patients in the area of the microvascular tissue of the optic nerve head. GRAEFES ARCHIVE FOR CLINICAL AND EXPERIMENTAL OPHTHALMOLOGY, 2020, no. 1, p. 1-12. ISSN: 0721-832X.
    Detail | WWW | Full text in the Digital Library

  • 2019

    VIČAR, T.; GUMULEC, J.; BALVAN, J.; HRACHO, M.; KOLÁŘ, R. Label-free nuclear staining reconstruction in quantitative phase images using deep learning. In World Congress on Medical Physics and Biomedical Engineering, June 3-8, 2018, Prague, Czech Republic. Springer, Singapore, 2019. p. 239-242. ISBN: 978-981-10-9034-9.
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    VALTEROVÁ, E.; TORNOW, R.; KOLÁŘ, R. Estimation of Time Delay Between Artery and Vein Pulsation using Experimental Video-Ophthalmoscope. In Proceedings of IEEE Engineering in Medicine and Biology Conference. Proceedings IEEE EMBC. Berlin, Germany: IEEE, 2019. p. 4721-4724. ISBN: 978-1-5386-1311-5. ISSN: 1557-170X.
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    VIČAR, T.; BALVAN, J.; JAROŠ, J.; JUG, F.; KOLÁŘ, R.; MASAŘÍK, M.; GUMULEC, J. Cell segmentation methods for label-free contrast microscopy: review and comprehensive comparison. BMC BIOINFORMATICS, 2019, vol. 20, no. 1, p. 1-25. ISSN: 1471-2105.
    Detail | WWW | Full text in the Digital Library

    VIČAR, T.; KOLÁŘ, R. Univerzální nástroj pro regresi a segmentaci obrazů pomocí hlubokého učení. In Trendy v biomedicínskom inžinierstve 2019. Terchová, Slovensko: Žilinská univerzita, 2019. p. 1-5. ISBN: 978-80-554-1587-1.
    Detail

    LABOUNKOVÁ, I.; LABOUNEK, R.; ODSTRČILÍK, J.; HRACHO, M.; NESTRAŠIL, I.; TORNOW, R.; KOLÁŘ, R. Retinal pulsatile shift enhancement with blind source separation. INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE - ARVO 2019. INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE. 2019. p. 1-3. ISSN: 0146-0404.
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    KOLÁŘ, R.; ODSTRČILÍK, J.; LABOUNKOVÁ, I.; HRACHO, M.; TORNOW, R. Eye movement analysis using a binocular video-ophthalmoscope. In Proceedings of IEEE Engineering in Medicine and Biology Conference. Proceedings IEEE EMBC. 2019. p. 4725-4728. ISSN: 1557-170X.
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    LABOUNKOVÁ, I.; LABOUNEK, R.; ODSTRČILÍK, J.; HRACHO, M.; NESTRAŠIL, I.; TORNOW, R.; KOLÁŘ, R. Blind Source Separation of Different Retinal Pulsatile Patterns from Simultaneous Long-term Binocular Ophthalmoscopic Video-records. In Proceedings of IEEE Engineering in Medicine and Biology Conference. Proceedings IEEE EMBC. 2019. p. 4729-4732. ISSN: 1557-170X.
    Detail | WWW

  • 2018

    HRACHO, M.; KOLÁŘ, R.; LABOUNKOVÁ, I.; ODSTRČILÍK, J.; TORNOW, R. Automatic detection of spontaneous venous pulsations using retinal image sequences. In Proceedings of the IV ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing: VipIMAGE 2017. Taylor and Francis, Publication, 2018. p. 827-833. ISBN: 978-3-319-68194-8.
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    JAKUBÍČEK, R.; CHMELÍK, J.; NECKÁŘ, J.; KOLÁŘ, R. Automatic Segmentation of Myocardial Infarction in Rats Subjected to Regional Ischemia. In Computing in Cardiology 2018. Computing in Cardiology. Maastricht, Netherlands: Computing in Cardiology, 2018. p. 1-4. ISSN: 2325-887X.
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    KOLÁŘ, R.; TORNOW, R.; HORN, F.; ODSTRČILÍK, J. Development of a binocular video-ophthalmoscope to compare parameters of heart beat induced blood volume changes between both eyes. USA: Association for Research in Vision and Ophthalmology, 2018. p. 5859-5859.
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    TORNOW, R.; ODSTRČILÍK, J.; KOLÁŘ, R. Time-resolved quantitative inter-eye comparison of cardiac cycle-induced blood volume changes in the human retina. Biomedical Optics Express, 2018, vol. 9, no. 12, p. 6237-6254. ISSN: 2156-7085.
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    HESKO, B.; KOLÁŘ, R.; HARABIŠ, V. Optical Disc Segmentation Using Fully Convolutional Neural Network in Retina Images. In Proceedings of IEEE Student Branch Conference Blansko 2018. 2018. Brno: Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií, 2018. p. 16-20. ISBN: 978-80-214-5661-7.
    Detail

  • 2017

    ŠTOHANZLOVÁ, P.; KOLÁŘ, R. Tissue perfusion modelling in optical coherence tomography. BIOMED ENG ONLINE, 2017, vol. 16, no. 1, p. 1-16. ISSN: 1475-925X.
    Detail | WWW | Full text in the Digital Library

    LIBERDOVÁ, I.; KOLÁŘ, R. Simultaneous ECG, finger and retinal photoplethysmography measurement. In Proceedings of The 23rd Conference STUDENT EEICT 2017. 1. Brno: Vysoké učení technické vBrně, Fakulta elektrotechniky a komunikačních technologií, 2017. p. 329-333. ISBN: 978-80-214-5496- 5.
    Detail

    ŠIKNER, T.; KOLÁŘ, R. Impact of gain on high–frequency contrast– enhanced ultrasound video and radio frequency data. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2017, vol. 19, no. 3, p. 73-77. ISSN: 1213-1539.
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    HESKO, B.; KOLÁŘ, R.; HARABIŠ, V. Design of an experimental laser speckle contrast imaging system and image evaluation. Lékař a technika, 2017, vol. 47, no. 3, p. 101-107. ISSN: 0301-5491.
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    VIČAR, T.; KOLÁŘ, R. Random Forests Pixel-wise Classification for Detection and Segmentation of Cells in the Images from Holographic Microscope. In Proceedings of IEEE Student Branch Conference Mikulov 2017. Brno: Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií, 2017. p. 67-70. ISBN: 978-80-214-5526-9.
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    HESKO, B.; KOLÁŘ, R.; HARABIŠ, V. Vessels model for laser speckle contrast imaging method. In Proceedings of IEEE Student Branch Conference Mikulov 2017. Brno: Vysoké učení technické v Brně, Fakulta elektrotechniky a komunikačních technologií, 2017. p. 25-29. ISBN: 978-80-214-5526- 9.
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    TORNOW, R.; MILCZAREK, A.; ODSTRCILIK, J.; KOLAR, R. Binocular video ophthalmoscope for simultaneous recording of sequences of the human retina to compare dynamic parameters. In SPIE Proceedings (Optical Society of America). Novel Biophotonics Techniques and Applications IV. Mnichov: 2017. p. 1-6. ISBN: 9781510612846.
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    KOLÁŘ, R.; LABOUNKOVÁ, I.; ODSTRČILÍK, J.; HRACHO, M.; TORNOW, R. Detection of distorted frames in retinal video-sequences via machine learning. In SPIE Proceedings (Optical Society of America). Novel Biophotonics Techniques and Applications IV. SPIE-OSA, 2017. p. 1-4. ISBN: 9781510612846.
    Detail

  • 2016

    KOLÁŘ, R.; TORNOW, R.; ODSTRČILÍK, J.; LIBERDOVÁ, I. Registration of retinal sequences from new video-ophthalmoscopic camera. BIOMED ENG ONLINE, 2016, vol. 15, no. 57, p. 1-17. ISSN: 1475-925X.
    Detail | WWW | Full text in the Digital Library

    MÉZL, M.; JIŘÍK, R.; DVOŘÁKOVÁ, L.; DRAŽANOVÁ, E.; KOLÁŘ, R. Comparison of Arterial Input Function Models for Small-Animal Ultrasound Perfusion Imaging. In Proceedings of 2016 IEEE International Ultrasonics Symposium. Tours, Francie: IEEE Ultrasonics, Ferroelectrics, and Frequency Control Society, 2016. p. 1-4. ISBN: 978-1-4673-9897-8.
    Detail | WWW

    LIBERDOVÁ, I.; KOLÁŘ, R. Video Quality Assessment in Experimental Retinal Imaging. Sborník příspěvků studentské konference Blansko. 1. Blansko: Brno University of Technology, 2016. p. 51-54. ISBN: 978-80-214-5389-0.
    Detail

    LIBERDOVÁ, I.; KOLÁŘ, R.; TORNOW, R. Image Quality Assessment of ophthalmologic videosequences using phase correlation. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2016, vol. 18, no. 5, p. 153-159. ISSN: 1213-1539.
    Detail | WWW

  • 2015

    ODSTRČILÍK, J.; KOLÁŘ, R.; TORNOW, R.; BUDAI, A.; JAN, J.; MACKOVÁ, P.; VODÁKOVÁ, M. Analysis of the Retinal Nerve Fiber Layer Texture Related to the Thickness Measured by Optical Coherence Tomography. In Developments in Medical Image Processing and Computational Vision. Lecture Notes in Computational Vision and Biomechanics. Switzerland: Springer International Publishing, 2015. p. 19-40. ISBN: 978-3-319-13406-2.
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    ŠIKNER, T.; KOLÁŘ, R. Registration of Contrast- Enhanced Ultrasound Sequences. In Proceedings of the 21st Conference STUDENT EEICT 2015. 2015. p. 495-499. ISBN: 978-80-214-5148- 3.
    Detail

    MÉZL, M.; JIŘÍK, R.; HARABIŠ, V.; KOLÁŘ, R.; STANDARA, M.; NYLUND, K.; GILJA, O.; TAXT, T. Absolute ultrasound perfusion parameter quantification of a tissue-mimicking phantom using bolus tracking. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2015, vol. 62, no. 5, p. 983-987. ISSN: 0885-3010.
    Detail

    ŠIKNER, T.; JANOUŠEK, O.; KOLÁŘ, R. Detrended fluctuation analysis of heart rate variability: Comparison of classic and frequency- based parameters. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2015, vol. 6, no. 2, p. 30-36. ISSN: 1213- 1539.
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    ŠTOHANZLOVÁ, P.; KOLÁŘ, R. Flow rate estimation by optical coherence tomography using contrast dilution approach. In Optical Coherence Imaging Techniques and Imaging in Scattering Media. 9541. Munich: SPIE, 2015. p. 954107-1 (954107-6 p.)ISBN: 9781628417067.
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    KOLÁŘ, R.; TORNOW, R.; ODSTRČILÍK, J. Video ophthalmoscope measures fast temporal changes in the human retina. SPIE Newsroom, 2015, no. 2015, p. 1-2. ISSN: 1818- 2259.
    Detail

    DRAHANSKÝ, M.; KOLÁŘ, R.; MŇUK, T. Elektronické zařízení pro snímání obrazu sítnice a duhovky oka. Česká a slovenská oftalmologie, 2015, vol. 71, no. 6, p. 302-308. ISSN: 1211-9059.
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    TORNOW, R.; KOLÁŘ, R.; ODSTRČILÍK, J. Non- mydriatic video ophthalmoscope to measure fast temporal changes of the human retina. In Proceedings of SPIE, Volume 9540. 2015. p. 954006 (954006-6 p.)ISBN: 9781628417050.
    Detail

    MÉZL, M.; JIŘÍK, R.; SOUČEK, K.; KOLÁŘ, R. Evaluation of Accuracy of Bolus and Burst Method for Quantitative Ultrasound Perfusion Analysis with Various Arterial Input Function Models. In Proceedings on IEEE International Ultrasonics Symposium 2015. 2015. p. 1-4. ISBN: 978-1-4799-8182-3.
    Detail

    KOLÁŘ, R.; SEMERÁD, L.; DRAHANSKÝ, M.; ODSTRČILÍK, J.; HÁJEK, J.; BOROVSKÝ, J. Bimodal Eye Imaging System for Biometric and Medical Applications. Security and Protection of Information 2015. Brno: University of Defence in Brno, 2015. p. 83-95. ISBN: 978-80-7231-997-8.
    Detail

    HÁJEK, J.; DRAHANSKÝ, M.; KOLÁŘ, R.; ODSTRČILÍK, J.; BOROVSKÝ, J. Bimodal eye imaging system. In Signal-Image Technology and Internet-Based Systems. Bangkok: Institute of Electrical and Electronics Engineers, 2015. p. 572-575. ISBN: 978-1-4673-9721-6.
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    ODSTRČILÍK, J.; ČMIEL, V.; KOLÁŘ, R.; RONZHINA, M.; BAIAZITOVA, L.; PEŠL, M.; PŘIBYL, J.; PROVAZNÍK, I. Computer Analysis of Isolated Cardiomyocyte Contraction Process via Advanced, Image Processing Techniques. In Computing in Cardiology 2015. 42. Nice, France: Computing in Cardiology, Inc., 2015. p. 453-456. ISBN: 978-1-4799-4347- 0.
    Detail

    ODSTRČILÍK, J.; KOLÁŘ, R.; HARABIŠ, V.; TORNOW, R. Classification- Based Blood Vessel Segmentation in Retinal Images. In Computational Vision and Medical Image Processing V. London, UK: CRC Press Taylor and Francis Group, 2015. p. 95-100. ISBN: 978-1-138-02926- 2.
    Detail

    KOLÁŘ, R.; TORNOW, R.; ODSTRČILÍK, J. Retinal Image Registration for Eye Movement Estimation. In Proceedings of IEEE EMBC. Proceedings IEEE EMBC. 2015. p. 5247-5250. ISBN: 978-1-4244-9270-1. ISSN: 1557-170X.
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  • 2014

    ODSTRČILÍK, J.; KOLÁŘ, R.; TORNOW, R.; JAN, J.; BUDAI, A.; MAYER, M.; VODÁKOVÁ, M.; LAEMMER, R.; LAMOŠ, M.; KUNA, Z.; GAZÁREK, J.; KUBĚNA, T.; ČERNOŠEK, P.; RONZHINA, M. Thickness related textural properties of retinal nerve fiber layer in color fundus images. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2014, vol. 38, no. 6, p. 508-516. ISSN: 0895-6111.
    Detail | WWW | Full text in the Digital Library

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; TORNOW, R.; BUDAI, A. Blood Vessel Segmentation in Video- Sequences From the Human Retina. In 2014 IEEE International Conference on Imaging Systems and Techniques (IST) Proceedings. Santorini, Greece: IEEE, 2014. p. 129-133. ISBN: 978-1-4799-6748- 3.
    Detail

    ŠTOHANZLOVÁ, P.; KOLÁŘ, R. Fantom pro optickou koherentní tomografii - použití pro perfuzní analýzu. In Nové směry v biomedicínském inženýrství. Brno: UBMI, VUT v Brně, 2014. p. 61-70. ISBN: 978-80-214-5049- 3.
    Detail

    HÁJEK, J.; DRAHANSKÝ, M.; KOLÁŘ, R. Experimental ophthalmic multimodal imaging system for iris and retina. In Proceedings of IIAI 3rd International Conference on Advanced Applied Informatics. Kitakyushu: IEEE Computer Society, 2014. p. 676-679. ISBN: 978-1-4799-4174-2.
    Detail

    KOLÁŘ, R.; HOEHER, B.; ODSTRČILÍK, J.; SCHMAUSS, B.; JAN, J. Registration of image sequences from experimental low-cost fundus camera. In Biomedical Image Registration. Lecture Notes in Computer Science. London: Springer International Publishing, 2014. p. 174-183. ISBN: 978-3-319-08553-1.
    Detail | WWW

    KOLÁŘ, R.; PODLIPNÁ, P. Analysis of images from optical coherence tomography for the nanoparticle transport. In Medical Image Understanding and Analysis. London: BMVA, 2014. p. 215-221. ISBN: 1-901725-51- 0.
    Detail

    ŠIKNER, T.; KOLÁŘ, R. Modifikace detrendované analýzy fluktuace využívající charakteristický tvar DFA křivky. In Nové směry v biomedicínském inženýrství. 2014. p. 55-60. ISBN: 978-80-214-5049- 3.
    Detail

  • 2013

    JIŘÍK, R.; NYLUND, K.; TAXT, T.; MÉZL, M.; HAUSKEN, T.; HARABIŠ, V.; KOLÁŘ, R.; STANDARA, M.; GILJA, O. Parametric Ultrasound Perfusion Analysis Parametric Ultrasound Perfusion Analysis Combining Bolus Tracking and Replenishment. In 2012 IEEE International Ultrasonics Symposium Proceedings. 2013. p. 1323-1326. ISBN: 978-1-4577-1253- 1.
    Detail

    HARABIŠ, V.; KOLÁŘ, R.; MÉZL, M.; JIŘÍK, R. Comparison and evaluation of indicator dilution models for bolus of ultrasound contrast agents. PHYSIOLOGICAL MEASUREMENT, 2013, vol. 34, no. 2, p. 151-162. ISSN: 0967- 3334.
    Detail

    ODSTRČILÍK, J.; KOLÁŘ, R.; BUDAI, A.; HORNEGGER, J.; JAN, J.; GAZÁREK, J.; KUBĚNA, T.; ČERNOŠEK, P.; SVOBODA, O.; ANGELOPOULOU, E. Retinal Vessel Segmentation by Improved Matched Filtering: Evaluation on a New High– Resolution Fundus Image Database. IET Image Processing, 2013, vol. 7, no. 4, p. 373-383. ISSN: 1751- 9659.
    Detail | WWW

    SLÁVIK, V.; KOLÁŘ, R.; HARABIŠ, V.; JIŘÍK, R. Application of Nakagami Distributions in Ultrasound Contrast Imaging. In Measurement 2013 Proceedings. Slovakia: VEDA, 2013. p. 117-120. ISBN: 978-80-969672-5- 4.
    Detail

    PODLIPNÁ, P.; KOLÁŘ, R. Single fiber perfusion phantom for optical coherence tomography. In Optical Coherence Tomography and Coherence Techniques VI. PROCEEDINGS OF SPIE. Munich, Germany: 2013. p. 88020Q- 1 (88020Q-6 p.)ISBN: 978-0-8194-9651- 5.
    Detail

    SLÁVIK, V.; KOLÁŘ, R.; PODLIPNÁ, P. Laboratorní úlohy pro výuku lékařské diagnostické techniky. In Trendy v biomedicínskom inžinierstve 2013 - Zborník konferencie. Košice: Technická univerzita v Košiciach, 2013. p. 27-29. ISBN: 978-80-8086-208- 4.
    Detail

    KOLÁŘ, R.; TORNOW, R.; LAEMMER, R.; ODSTRČILÍK, J.; GAZÁREK, J.; JAN, J.; KUBĚNA, T.; ČERNOŠEK, P.; MAYER, M. Analysis of Visual Appearance of Retinal Nerve Fibers in High Resolution Fundus Images: A Study on Normal Subjects. Computational and Mathematical Methods in Medicine (Print), 2013, vol. 2013, no. 12, p. 1-10. ISSN: 1748-670X.
    Detail | WWW | Full text in the Digital Library

    ODSTRČILÍK, J.; KOLÁŘ, R.; TORNOW, R.; BUDAI, A.; JAN, J.; MACKOVÁ, P.; VODÁKOVÁ, M. Analysis of the retinal nerve fiber layer texture related to the thickness measured by optical coherence tomography. In Computational Vision and Medical Image Processing IV. 4. London: Taylor & Francis Group, 2013. p. 105-110. ISBN: 978-1-138-00081- 0.
    Detail

    KOLÁŘ, R.; HARABIŠ, V.; ODSTRČILÍK, J. Hybrid retinal image registration using phase correlation. IMAGING SCIENCE JOURNAL, 2013, vol. 61, no. 4, p. 269-384. ISSN: 1368- 2199.
    Detail | WWW

    KOLÁŘ, R.; ODSTRČILÍK, J.; MACKOVÁ, P.; LAEMMER, R. Registration of the long- term autofluorescence retinal images taken from glaucomatic patients. In Computational Vision and Medical Image Processing. London: Taylor & Francis, 2013. p. 115-119. ISBN: 978-1-138-00081- 0.
    Detail

    MACKOVÁ, P.; KOLÁŘ, R.; ODSTRČILÍK, J. Analýza geometrického zkreslení multimodálních obrazových dat sítnice. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2013, vol. 15, no. 5, p. 315-321. ISSN: 1213- 1539.
    Detail

    JIŘÍK, R.; NYLUND, K.; GILJA, O.; MÉZL, M.; HARABIŠ, V.; KOLÁŘ, R.; STANDARA, M.; TAXT, T. Ultrasound perfusion analysis combining bolus-tracking and burst- replenishment. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2013, vol. 60, no. 2, p. 310-319. ISSN: 0885- 3010.
    Detail

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; MACKOVÁ, P. Analýza obrazových dat sítnice pro podporu diagnostiky glaukomu. In Nové směry v biomedicínském inženýrství. 2013. Brno, ČR: Společnost elektrotechnického inženýrství, 2013. p. 81-92. ISBN: 978-80-214-4814- 8.
    Detail

    SLÁVIK, V.; KOLÁŘ, R.; HARABIŠ, V.; JIŘÍK, R. Rician inverse Gaussian model of scattering in ultrasound contrast media. In 2013 IEEE International Ultrasonics Symposium Proceedings. 2013. p. 318-321. ISBN: 978-1-4673-5684- 8.
    Detail

  • 2012

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; GAZÁREK, J.; KUNA, Z.; VODÁKOVÁ, M. Analysis of retinal nerve fiber layer via Markov random fields in color fundus images. In Proceedings of 19th International Conference on Systems, Signals and Image Processing (IEEE - IWSSIP 2012). Vídeň, Rakousko: TU Wien, 2012. p. 504-507. ISBN: 978-1-4577-2191- 5.
    Detail

    PODLIPNÁ, P.; KOLÁŘ, R. Concentration influence on contrast agents properties in optical coherence tomography. In Student EEICT Proceedings of the 18th conference, Volume 3. 2012. p. 350-354. ISBN: 978-80-214-4462- 1.
    Detail

    KOLÁŘ, R.; JIŘÍK, R.; HARABIŠ, V. Nakagami model of scattering in ultrasound contrast media. In Proceedings of the IEEE International Ultrasonics Symposium 2012, Dresden. 2012. p. 410-412. ISBN: 978-1-4577-1253- 1.
    Detail

    HARABIŠ, V.; KOLÁŘ, R.; MÉZL, M. Influence of injection speed of contrast agent on perfusion analysis using fast bolus method. In Proceedings of the IEEE International Ultrasonics Symposium 2012, Dresden. 2012. p. 1319-1322. ISBN: 978-1-4577-1253- 1.
    Detail

    JAN, J.; ODSTRČILÍK, J.; GAZÁREK, J.; KOLÁŘ, R. Retinal Image Analysis Aimed at Blood Vessel Tree Segmentation and Early Detection of Neural- Layer Deterioration. COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, 2012, vol. 2012, no. 6, p. 431-441. ISSN: 0895- 6111.
    Detail

  • 2011

    MÉZL, M.; JIŘÍK, R.; BARTOŠ, M.; HARABIŠ, V.; KRATOCHVÍLA, J.; KOLÁŘ, R. Software Package for Dynamic Contrast- Enhanced Ultrasound Imaging. In Abstract Book - 2011 Joint National Ph.D. Conference in Medical Imaging and MedViz Conference. Bergen, Norway: University of Bergen, 2011. p. 120-121. ISBN: 978-82-993786-6- 6.
    Detail

    JAN, J.; KOLÁŘ, R.; KUBEČKA, L.; ODSTRČILÍK, J.; GAZÁREK, J. FUSION BASED ANALYSIS OF OPHTHALMOLOGIC IMAGE DATA. Kybernetika, 2011, vol. 47 (2011), no. 3, p. 455-481. ISSN: 0023- 5954.
    Detail

    BUDAI, A.; ODSTRČILÍK, J.; KOLÁŘ, R.; HORNEGGER, J.; JAN, J.; KUBĚNA, T.; MICHELSON, G. A Public Database for the Evaluation of Fundus Image Segmentation Algorithms. Proc. of the Association for Research in Vision and Ophthalmology conference (ARVO) 2011. ARVO 2011. Fort Lauderdale, Florida, USA: Association for Research in Vision and Ophthalmology, Inc., 2011. p. 1-2.
    Detail

    KUNA, Z.; KOLÁŘ, R. Modelování axiálního a laterálního rozlišení u OCT. In Trendy v biomedicínského inženýrství 2011. sborník konference Trendy v Biomedicínském inženýrství 2011. VŠB - Technická univerzita Ostrava, 2011. p. 32-35. ISBN: 978-80-248-2475- 8.
    Detail

    KUNA, Z.; KOLÁŘ, R. Experimentální určení axiálního rozlišení u systému optické koherenční tomografie. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2011, vol. 2011, no. 12, p. 1-4. ISSN: 1213- 1539.
    Detail

    HARABIŠ, V.; KOLÁŘ, R.; JIŘÍK, R. Registration of Ultrasound Image Sequences for Perfusion Analysis. In 19th European Signal Processing Conference (EUSIPCO-2011). 18th European Signal Processing Conference (EUSIPCO-2010). EURASIP. Barcelona: EURASIP, 2011. p. 1015-1019. ISBN: 978-3-642-03882- 2. ISSN: 2076- 1465.
    Detail

    KOLÁŘ, R.; ODSTRČILÍK, J.; HARABIŠ, V.; JAN, J. Illumination Correction and Contrast Equalization in Colour Fundus Images. In 19th European Signal Processing Conference (EUSIPCO-2011). 18th European Signal Processing Conference (EUSIPCO-2010). EURASIP. Barcelona: EURASIP, 2011. p. 298-302. ISSN: 2076- 1465.
    Detail

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; BUDAI, A. Gold Standard Database to Support Evaluation of Fundus Image Segmentation Methods. Abstracts of Contributions to 7th International Workshop on Data-Algorithms- Decision Making. UTIA. Praha, ČR: UTIA AV ČR, 2011. p. 46-46.
    Detail

    JAN, J.; KOLÁŘ, R.; KUBEČKA, L.; ODSTRČILÍK, J.; GAZÁREK, J. Ophthalmological Image Processing and Analysis in DAR - a survey. Abstracts of Contributions to 7th Intern. Workshop on Data - Algorithms - Decision making. 1. Praha: UTIA AVČR, 2011. p. 25-25.
    Detail

  • 2010

    ODSTRČILÍK, J.; KOLÁŘ, R.; HARABIŠ, V.; GAZÁREK, J.; JAN, J. Retinal Nerve Fiber Layer Analysis via Markov Random Fields Texture Modelling. In 18th European Signal Processing Conference (EUSIPCO-2010). 18th European Signal Processing Conference (EUSIPCO-2010). EURASIP. EURASIP, 2010. p. 1650-1654. ISSN: 2076- 1465.
    Detail

    KOLÁŘ, R.; HARABIŠ, V.; JIŘÍK, R. Registration of Ultrasound Contrast Images for Perfusion Analysis. In Proceedings of International Ultrasonics Symposium 2009. 2010. p. 1251-1254. ISBN: 978-1-4244-4390- 1.
    Detail

    KOLÁŘ, R.; ŠIKULA, V.; BAŠE, M. Retinal Image Registration using Local Phase Correlation. In Proceedings of Biosignal 2010: Analysis of Biomedical Signals and Images. 2010. p. 244-252. ISBN: 978-80-214-4106- 4.
    Detail

    KOLÁŘ, R.; TAŠEVSKÝ, P. Registration of 3D Retinal Optical Coherence Tomography Data and 2D Fundus Images. In Biomedical Image registration. Lecture Notes in Computer Science. 2010. p. 72-82. ISSN: 0302- 9743.
    Detail

    HARABIŠ, V.; KOLÁŘ, R.; JIŘÍK, R.; MÉZL, M. Perfusion Curves Modelling For Evaluating Of Ultrasound Image Registration. In Proceedings of Biosignal 2010: Analysis of Biomedical Signals and Images. Analysis of Biomedical Signals and Images. Brno University of Technology, 2010. p. 333-340. ISBN: 978-80-214-4106- 4. ISSN: 1211- 412X.
    Detail

    KOLÁŘ, R.; JIŘÍK, R.; HARABIŠ, V.; MÉZL, M.; BARTOŠ, M. Advanced Methods for Perfusion Analysis in Echocardiography. Physiological Research, 2010, vol. 59, no. S1, p. S33 (S41 p.)ISSN: 1802- 9973.
    Detail

    MÉZL, M.; JIŘÍK, R.; HARABIŠ, V.; KOLÁŘ, R. Quantitative Ultrasound Perfusion Analysis In Vitro. In Proceedings of Biosignal 2010: Analysis of Biomedical Signals and Images. Analysis of Biomedical Signals and Images. Brno University of Technology, 2010. p. 279-283. ISBN: 978-80-214-4106- 4. ISSN: 1211- 412X.
    Detail

    KOLÁŘ, R.; JIŘÍK, R.; HARABIŠ, V.; MÉZL, M.; BARTOŠ, M. Advanced Methods for Perfusion Analysis in Echocardiography. Physiological Research, 2010, vol. 59, no. Suppl 1, p. S33 (S41 p.)ISSN: 0862- 8408.
    Detail

    KUBEČKA, L.; JAN, J.; KOLÁŘ, R. Retrospective Illumination Correction of Retinal Images. International Journal of Biomedical Imaging, 2010, vol. 2010, no. 5, p. 201-223. ISSN: 1687- 4188.
    Detail

    GAZÁREK, J.; JAN, J.; KOLÁŘ, R.; ODSTRČILÍK, J. Bimodal Comparison of Retinal Nerve Fibre Layer Thickness: Fundus Camera versus Optical Coherence Tomography. Abstracts of Contributions to 6th International Workshop on Data-Algorithms- Decision Making. UTIA. Praha, ČR: UTIA AV ČR, 2010. p. 50-50.
    Detail

    ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J.; GAZÁREK, J. Retinal nerve fiber layer texture analysis via markov random fields. Abstracts of Contributions to 6th International Workshop on Data-Algorithms- Decision Making. UTIA. Praha, ČR: UTIA AV ČR, 2010. p. 49-49.
    Detail

    NOVOTNÝ, A.; ODSTRČILÍK, J.; KOLÁŘ, R.; JAN, J. Texture Analysis Of Nerve Fibre Layer In Retinal Images Via Local Binary Patterns And Gaussian Markov Random Fields. In 20th Biennial International EURASIP Conference BIOSIGNAL 2010. Analysis of Biomedical Signals and Images. EURASIP. Brno: EURASIP, 2010. p. 308-315. ISBN: 978-80-214-4106- 4. ISSN: 1211- 412X.
    Detail

  • 2009

    ODSTRČILÍK, J.; JAN, J.; KOLÁŘ, R.; GAZÁREK, J. Improvement of Vessel Segmentation by Matched Filtering in Colour Retinal Images. In IFMBE Proceedings of World Congress on Medical Physics and Biomedical Engineering. Springer. Springer, 2009. p. 327-330. ISBN: 978-3-642-03897- 6.
    Detail

    KOLÁŘ, R.; JAN, J.; LAEMMER, R.; MARDIN, C. The segmentation of zones with increased autofluorescence in the junctional zone of parapapillary atrophy. PHYSIOLOGICAL MEASUREMENT, 2009, vol. 2009, no. 30, p. 505-516. ISSN: 0967-3334.
    Detail | WWW

    KOLÁŘ, R.; ČERNOŠEK, P.; JAN, J.; KUBĚNA, T. Statistická analýza vrstvy nervových vláken v barevných digitálních snímcích sítnice. Česká a slovenská oftalmologie, 2009, vol. 65, no. 2, p. 53-58. ISSN: 1803- 6597.
    Detail

    KOLÁŘ, R.; HARABIŠ, V. Automatic Rigid Registration and Analysis of Colour Fundus Image in Patients with Diabetic Retinopathy. World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany. Springer, 2009. p. 251-254. ISBN: 978-3-642-03881- 5.
    Detail

    ODSTRČILÍK, J.; JAN, J.; KOLÁŘ, R. Vessel Segmentation by Matched Filtering in Colour Retinal Images. Abstracts of Contributions to 5th International Workshop on Data - Algorithms - Decision Making. Ústav teorie informace AV ČR, v.v.i. 2009. p. 48-48.
    Detail

    GAZÁREK, J.; JAN, J.; KOLÁŘ, R. Improvement of Textural Analysis Mathod Aimed to Detection of Neural Fibre Layer Loss in Retinal Images. Abstracts of Contributions to 5th International Workshop on Data - Algorithms - Decision Making. Ústav teorie informace AV ČR, v.v.i. UTIA AV ČR, 2009. p. 41-41.
    Detail

    KOLÁŘ, R.; VÁCHA, P. Texture Analysis of the Retinal Nerve Fiber Layer in Fundus Images via Markov Random Fields. World Congress on Medical Physics and Biomedical Engineering, September 7 - 12, 2009, Munich, Germany. Springer, 2009. p. 247-250. ISBN: 978-3-642-03881- 5.
    Detail

    TAŠEVSKÝ, P.; KOLÁŘ, R. Segmentace cévního řečiště ve fotografiích sítnice s využitím 2D diskrétní vlnkové transformace. Elektrorevue - Internetový časopis (http://www.elektrorevue.cz), 2009, vol. 2009, no. 48, p. 1-4. ISSN: 1213- 1539.
    Detail

  • 2008

    BARTOŠ, M.; JIŘÍK, R.; HARABIŠ, V.; KOLÁŘ, R. Measurement of SonoVue TM Properties for Quantitative Contrast Ultrasonic Imaging. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 22-22. ISSN: 1211- 412X.
    Detail

    KOLÁŘ, R.; JAN, J.; KUBEČKA, L. Registration and Fusion of the Autofluorescent and Infrared Retinal Images. International Journal of Biomedical Imaging, 2008, vol. 2008, no. 513478, p. 1-11. ISSN: 1687- 4188.
    Detail

    KOLÁŘ, R.; JAN, J. Detection of Glaucomatous Eye via Color Fundus Images Using Fractal Dimensions. Radioengineering, 2008, vol. 17, no. 3, p. 109-114. ISSN: 1210- 2512.
    Detail

    GAZÁREK, J.; JAN, J.; KOLÁŘ, R. DETECTION OF NEURAL FIBRE LAYER IN RETINAL IMAGES VIA TEXTURAL ANALYSIS. Analysis of Biomedical Signals and Images, 2008, vol. 2008(19), no. 1, p. 181-187. ISSN: 1211- 412X.
    Detail

    HARABIŠ, V.; KOLÁŘ, R. Automatic Landmark Detection for Retinal Image Registration. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 1-8. ISSN: 1211- 412X.
    Detail

    KOLÁŘ, R. Detekce výpadku vrstvy nervových vláken v barevných fundus snímcích. Sborník abstrakt, Kongres České glaukomové společnosti. 2008. p. 58-58. ISBN: 978-80-254-1568- 9.
    Detail

    MALÍNSKÝ, M.; KOLÁŘ, R.; JAN, J. Localization of the Optic Nerve Head in Colour Fundus Images. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 1-7. ISSN: 1211- 412X.
    Detail

    KOLÁŘ, R.; JAN, J.; URBÁNEK, D. Texture Based Discrimination of Normal and Glaucomatous Retina. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 1-5. ISSN: 1211- 412X.
    Detail

    LAEMMER, R.; KOLÁŘ, R.; JAN, J.; MARDIN, C. Impact Of Parapapillary Autofluorescence In Glaucoma: Clinical Aspects. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 1-4. ISSN: 1211-412X.
    Detail | WWW

    KOLÁŘ, R. Detekce výpadku vrstvy nervových vláken v barevných fundus snímcích. Sborník abstrakt - Kongres České glaukomové společnosti. 2008. p. 58-58. ISBN: 978-80-254-1568- 9.
    Detail

    ODSTRČILÍK, J.; JAN, J.; KOLÁŘ, R. Segmentation of Vessel Structure in Retinal Images by Matched Filtering. Analysis of Biomedical Signals and Images, 2008, vol. 2008(19), no. 1, p. 178-183. ISSN: 1211- 412X.
    Detail

  • 2007

    KOLÁŘ, R.; JAN, J. Analýza barevných snímků, HRT obrazů a autofluorescenčních obrazů pro podporu diagnostiky glaukomu. In Sborník abstrakt - XV. sjezd České oftalmologické společnosti. Brno: ČOS, 2007. p. 173-173. ISBN: 978-80-87086-01- 8.
    Detail

    KOLÁŘ, R.; JAN, J. Vývoj nových metod pro včasnou diagnostiku glaukomu. In Trendy v biomedicínském inženýrství. Kladno: ČVUT v Praze, 2007. p. 212-215. ISBN: 978-80-01-03777- 5.
    Detail

    KOLÁŘ, R.; JAN, J.; JIŘÍK, R. Semiautomatic Detection and Evaluation of Autofluorescent Areas in Retinal Images. In Sborník konference 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. 2007. p. 3327-3330.
    Detail

    KOLÁŘ, R. Lékařská diagnostická technika. 2007.
    Detail

    KOLÁŘ, R.; JAN, J. Registration framework for the autofluorescence and infrared images. In Abstracts of Contributions to 3rd International Workshop DAR. Praha: ÚTIA AV ČR, 2007. p. 18-18.
    Detail

    KOLÁŘ, R.; JAN, J. Texture Analysis of Retinal Nerve Fiber Layer in Color Fundus Images. In Abstracts of Contributions to 3rd International Workshop DAR. Praha: ÚTIA AV ČR, 2007. p. 50-50.
    Detail

    JIŘÍK, R.; JAN, J.; PETERLÍK, I.; HEMZAL, D.; FILIPÍK, A.; ZAČAL, J.; ROLEČEK, J.; KOLÁŘ, R. Ultrasound Transmission Tomography. In Sborník 7. česko- slovenské konference Trendy v biomedicínském inženýrství. Kladno, Česká republika: ČVUT, FBMI, 2007. p. 208-211. ISBN: 978-80-01-03777- 5.
    Detail

  • 2006

    Zacal J, Hemzal D, Jan J, Filipik A, Jirik R, Kolar R. Comparison of Wave-Equation Versus Measurement- Processing Transducer Calibration for Ultrasonic Transmission Tomography. In Proceedings of 28th Annual International Conference IEEE EMBS. New York (USA): 2006. p. 2754 ( p.)ISBN: 14244-0033- 3.
    Detail

    KOLÁŘ R., JAN J., KUBEČKA L. Computer support for early glaucoma diagnosis based on the fused retinal images. Scripta medica, 2006, vol. 2006, no. 79, p. 249-259. ISSN: 1211- 3395.
    Detail

    Zacal J., Jan J., Kolar R. Image Data Registration as a Means to 3D Ultrasonic Data Positioning. In Analysis of Biomedical Signals and Images - Proceedings of 18th Biennial International EURASIP Conference BIOSIGNAL 2006. 18th EURASIP intern. biennial conference BIOSIGNAL 2006. Brno: VUTIUM PRESS, 2006. p. 318 ( p.)ISBN: 80-214-3152- 0.
    Detail

    Kolář R, Kubečka L, Flusser J, Jan J, Jiřík R. Noise Suppression In Retinal Autofluorescence Images. In Analysis of Biomedical Signals and Images. Brno: VUTIUM Press, 2006. p. 302 ( p.)ISBN: 80-214-3152- 0.
    Detail

    Kolář R, Kubečka L, Jan J, Jiřík R. Image Improvement in Confocal Scanning Laser Ophthalmoscopy. In Analysis of Biomedical Signals and Images. Brno: VUTIUM Press, 2006. p. 239 ( p.)ISBN: 80-214-3152- 0.
    Detail

    Kolář R, Jiřík R, Začal J, Jonáková M, Jan J. 3D Ultrasound Point Spread Function Measurement and Evaluation. In Analysis of Biomedical Signals and Images. Brno: VUTIUM Press, 2006. p. 305 ( p.)ISBN: 80-214-3152- 0.
    Detail

    ZAČAL, J., HEMZAL, D., JAN, J., FILIPÍK, A., JIŘÍK, R., KOLÁŘ, R. Comparison of Wave-Equation Based Versus Measurement- Processing Based Transducer Calibration for Ultrasonic Transmission Tomography. In Abstracts of Contributions to 2nd International Workshop on Data – Algorithms – Decision Making. ÚTIA 2006/ 32. Praha: ÚTIA AV ČR, 2006. p. 50 ( p.)
    Detail

    PETERLÍK, I.; JIŘÍK, R.; RUITER, N.; STOTZKA, R.; JAN, J.; KOLÁŘ, R. Ultrasound Transmission Tomography Using Algebraic Reconstruction Techniques. In Abstracts of Contributions to 2nd International Workshop on Data - Algorithms - Decision Making. Praha: UTIA, AV ČR, 2006. p. 34 ( p.)
    Detail

    KOLÁŘ, R., JAN, J., LAEMMER, R., MARDIN, CH.Y., JIŘÍK, R., ZAČAL, J., FILIPÍK, A., PETERLÍK, I. Analysis of Retinal Autofluorescence Images for Early Glaucoma Diagnosis. In Abstracts of Contributions to 2nd International Workshop on Data - Algorithms - Decision Making. Česká Republika: DAR ÚTIA Praha, 2006. p. 35 ( p.)
    Detail

    KOLÁŘ, R., JAN, J., KUBĚNA, T., ČERNOŠEK, P., JIŘÍK, R., ZAČAL, J., FILIPÍK, A., PETERLÍK, I. Properties of the Retinal Nerve Fiber Layer via Color Fundus Images. In Abstracts of Contributions to 2nd International Workshop on Data - Algorithms - Decision Making. Česká Republika: DAR ÚTIA Praha, 2006. p. 52 ( p.)
    Detail

    Igor Peterlík, Radovan Jiřík, Nicole Ruiter, Rainer Stotzka, Jiří Jan Radim Kolář. Algebraic Reconstruction Technique for Ultrasound Transmission Tomography. In Proceedings of International Conference ITAB 2006. Ioannina, Řecko: The University of Ioannina, 2006. p. 1 ( p.)
    Detail

    Kubecka L., Jan J., Kolar R., Jirik R. IMPROVING QUALITY OF AUTOFLUORESCENCE IMAGES USING NON- RIGID IMAGE REGISTRATION. In Proc. 14th European Signal Processing Conf. EUSIPCO 2006. 1. Florence (Italy): Univ. of Pisa, 2006. p. 357 ( p.)
    Detail

    KUBEČKA, L.; JAN, J.; KOLÁŘ, R.; JIŘÍK, R. Elastic Registration for Auto- fluorescence Image Averaging. In Proc. 28th IEEE/EMBS Ann.Intern. Conf. 2006. New York: IEEE, 2006. p. 1948 ( p.)ISBN: 1-4244-0033- 3.
    Detail

    J.Jan, R.Kolar,R.Jirik, A.Filipik,L.Kubečka,I.Peterlik,J. Zacal. Overview of Biomedical Image Processing Activities of Brno Group of the DAR. In Abstracts of 2nd Int. Workshop on Data-Algorithms- Decision making. Praha: UTIA AVČR Praha, 2006. p. 1 ( p.)
    Detail

    JIŘÍK, R.; PETERLÍK, I.; ZAČAL, J.; JAN, J.; RUITER, N.; STOTZKA, R.; KOLÁŘ, R.; KUBEČKA, L. Attenuation Imaging in Ultrasound Transmission Tomography. In Proceedings of 18th Int. EURASIP Conf. BIOSIGNAL 2006. Brno, Česká republika: VUTIUM Press, 2006. p. 233 ( p.)ISBN: 80-214-3152- 0.
    Detail

    R. Jiřík, I. Peterlík, J. Jan, J. Začal, R. Kolář, N. Ruiter, R. Stotzka. Reconstruction of Attenuation Images in Ultrasound Transmission Tomography. In Abstracts of Contributions to 2nd International Workshop on Data - Algorithms - Decision Making. Třešť, Česká Republika: DAR ÚTIA Praha, 2006. p. 48 ( p.)
    Detail

    VALLA, M.; KOLÁŘ, R. Fraktály v obrezech. In Proceedings of the 12th Conference STUDENT EEICT 2006. Brno: VUT v Brně, 2006. p. 95-97. ISBN: 80-214-3160- 1.
    Detail | WWW

    Kubecka L, Kolar R, Jan J, Jirik R. Retrospective Illumination Correction of Retinal Images. In Proceedings of 17th International EURASIP Conference BIOSIGNAL 2004. Brno: 2006. p. 257 ( p.)
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  • 2005

    Kolář Radim, Jiří Jan. Tissue Models and Speckle Reduction in Medical Ultrasound Images. In Image Analysis. Lecture Notes in Computer Science. Springer. Lecture Notes in Computer Science, 2005. p. 1017-1026. ISBN: 3-540-26320- 9. ISSN: 0302- 9743.
    Detail

    Kolář, R. Jan, J. Chaloupka, V. ULTRASOUND TISSUE CHARACTERIZATION USING NAKAGAMI MODEL WITH TEMPORAL AVERAGING. In IFMBE Proceedings - EMBEC 2005. IFMBE. Praha: IFMBE, 2005. p. 616-620.
    Detail

    Kolář, R. Jan, J. Chrástek, R. Laemmer, R. Mardin, Ch.Y. AUTOFLUORESCENCE AREAS DETECTION IN HRA IMAGES. In IFMBE Proceedings. Praha: IFMBE, 2005. p. 2384-2388.
    Detail

    Kolář, R. Kubečka, L. Jan, J. Barevná stereoskopie očního pozadí za využití digitální fotografie a konfokálního laserového oftalmoskopu. In DIGITÁLNÍ ZOBRAZOVÁNÍ V BIOLOGII A MEDICÍNĚ 2005, elektronický sborník. České Budějovice: 2005. p. 1 ( p.)
    Detail | WWW

    Jan, J., Jiřík, R., Kolář, R., Filipík, A., Kubečka, L. Selected Problems of Medical Image Data Processing (vyžádaný referát). In 2. společná konference. Praha: UTIA AVČR Praha, 2005. p. 1 ( p.)
    Detail

    Začal J, Jan J, Jiřík J, Kolář J, Kubečka L, Peterlík I. Deploying a Campus Grid: Experience With The Condor Distributed Batch System. In International Workshop on Data - Algorithms - Decision Making. Praha: UTIA - Academy of Science of Czech Republic, 2005. p. 1 ( p.)
    Detail

    Radovan Jiřík, Igor Peterlík, Jiří Jan, Nicole Ruiter, Rainer Stotzka, Radim Kolář, Libor Kubečka, Jiří Začal. Model of Radiofrequency Data Acquisition in Ultrasound Transmission Tomography. In Abstracts of Contributions to International Workshop on Data - Algorithms - Decision Making. Praha: DAR UTIA AV ČR, 2005. p. 1 ( p.)
    Detail

    KOLÁŘ, R.,KUBEČKA, L., JAN, J. CHRÁSTEK, R. DISPARITY ESTIMATION IN UNCALIBRATED STEREO RETINAL IMAGES. In IFMBE Proceedings. Praha: IFMBE, 2005. p. 555-559.
    Detail

    Kubecka L., Jan J., Kolar R., Jirik R. Non-Rigid Registration of Time Series of Auto- Fluorescent HRA 2D Images. In Abstracts of Contributions to International Workshop on Data - Algorithms - Decision Making. 41. Praha: UTIA, Czech Academy of Sciencies, 2005. p. 3 ( p.)
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  • 2004

    KOLÁŘ, R., JIŘÍK, R. Nakagami- m Distribution In Echocardiography. In Analysis of Biomedical Signals and Images. Brno: Brno University of Technology, 2004. p. 343 ( p.)ISBN: 80-214-2633- 0.
    Detail

    KOLÁŘ, R., JIŘÍK, R., JAN, J. Estimator Comparison of the Nakagami- m Parameter and its Application in Echocardiography. Radioengineering, 2004, vol. 13, no. 1, p. 8-12. ISSN: 1210- 2512.
    Detail

    KOLÁŘ, R. Surface reconstruction from retinal laser images. In Proceedings of the 26th Annual International Conference of the IEEE EMBS. San Francisco: Engeneering in Medicine and Biology Society, 2004. p. 1233 ( p.)ISBN: 0-7803-8439- 3.
    Detail

    KOLÁŘ, R., KUBEČKA, L. Processing and Visualization of Retina Laser Images. In IWSSIP´ 04 ambient multimedia. Poznaň, Polsko: Polish Society for Theoretical and Applied Electrical Engineering, 2004. p. 403 ( p.)ISBN: 83-906074-8- 4.
    Detail

  • 2003

    KOLÁŘ, R., FEDRA, P., ROHEL, J., KUREČKA, R., JAN, J., CHALOUPKA, V. 3D interpolation for ultrasound volume reconstruction. In Proceedings of Radioelektronika 2003. Brno: Brno University of Technology, 2003. p. 119 ( p.)ISBN: 80-214-2383- 8.
    Detail

    KOLÁŘ, R., JAN, J. 3D imaging of retina laser images with Visualization Toolkit. In Proceedings of Radioelektronika 2003. VUTIUM BRNO. Brno: Brno University of Technology, 2003. p. 123 ( p.)ISBN: 80-214-2383- 8.
    Detail

    KOZUMPLÍK, J., KOLÁŘ, R., JAN, J. Číslicové zpracování a analýza signálů. Počítačová cvičení. (Elektronická skripta, BMI102). Brno: FEKT VUT v Brně, 2003. p. 1 ( p.)
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    KOLÁŘ, R., JAN, J. VISUALIZATION OF THE RETINA LASER IMAGES IN MATLAB. In Proceedings of Matlab 2003. Praha: Humusoft s.r.o., 2003. p. 306 ( p.)ISBN: 80-7080-526- 9.
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    KOLÁŘ, R., KOZUMPLÍK, J. Wavelet Packet Transform in Raw Ultrasound Signal Processing. Journal of Electrical Engineering, 2003, vol. 54, no. 1- 2, p. 42 ( p.)ISSN: 1335- 3632.
    Detail

    Kolář R., Kurečka R., Rohel J., Jan J., Chaloupka V. 3D Freehand Ultrasound Measurement System. In 3D Freehand Ultrasound Measurement System. Craiova, Rumunsko: The University of Medicine and Pharmacy of Craiova, 2003. p. 425 ( p.)
    Detail

  • 2002

    ZADRAŽIL, M., KOZUMPLÍK, J., KOLÁŘ, R. Denoising of ECG Signal with Real and Complex Wavelets. In Elektrotechnika a informatika 2002. Zapadočeská univerzita v Plzni: Zapadočeská univerzita v Plzni, 2002. p. 329 ( p.)ISBN: 80-7082-904- 4.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Speckle suppression and contrast enhancement in ultrasound images. In Analysis of biomedical signals and images. Brno: VUTIUM Press, 2002. p. 353 ( p.)ISBN: 80-214-2120- 7.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Komplexní vlnková transformace a filtrace obrazů. In Matlab 2002. Humusoft s.r.o. Praha: Humusoft, s.r.o., 2002. p. 252 ( p.)ISBN: 80-7080-500- 5.
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    KOZUMPLÍK, J., KOLÁŘ, R. Wavelet Denoising of Electrocardiograms. In Analysis of Biomedical Signals and Images. Brno: Vutium Press, 2002. p. 220 ( p.)ISBN: 80-214-2120- 7.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Noise suppression in ultrasound images in packet wavelet transform. In Radioelektronika 2002. Bratislava: 2002. p. 210 ( p.)ISBN: 80-227-1700- 2.
    Detail

  • 2001

    KOLÁŘ, R., KOZUMPLÍK, J. Fuzzy approach in ultrasound image segmentation. In Computational Intelligence, Theory and Applications. Lecture Notes in Computer Science 2206. Springer- Verlag Berlin Heidelberg: Springer- Verlag Berlin Heidelberg, 2001. p. 924 ( p.)ISBN: 3-540-42732- 5.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Denoising with real and complex wavelets. In DSP- MCOM 2001. Košice, Slovenská republika: Mercury Smékal Publishing House, 2001. p. 11 ( p.)ISBN: 80-89061-49- 4.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. FILTRACE SIGNÁLŮ POMOCÍ KOMPLEXNÍ VLNKOVÉ TRANSFORMACE. In Matlab 2001. Praha: Humusoft, 2001. p. 164 ( p.)ISBN: 80-7080-446- 7.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. ELIMINACE ŠUMU V ULTRAZVUKOVÝCH OBRAZECH. In Medifórum - Kongres Mefa 2001. Brno: BVV Veletrhy Brno, 2001. p. 1 ( p.)
    Detail

    KOLÁŘ, R. Ultrazvuková charakterizace tkání. 2001.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Adaptive noise suppression in ultrasound images via wavelet transform. In Proceedings of 7th Conference STUDENT FEI 2001. 2. Brno: Vysoké učení technické v Brně, FEI, 2001. p. 234 ( p.)ISBN: 80-214-1861- 5.
    Detail

    KOLÁŘ, R., KOLKA, M., KOZUMPLÍK, J., PROVAZNÍK, I. Wavelet Based Enhancement of Ultrasonic Signals for Edge Detection. In Proceedings of the 11- th International Conference Radioelektronika 2001. Brno: VUT BRNO, 2001. p. 198 ( p.)ISBN: 80-214-1861- 3.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Noise suppression in ultrasound images using wavelets. In Applied Electronics 2001. Plzeň: Západočeská universita, 2001. p. 130 ( p.)ISBN: 80-7082-758- 0.
    Detail

    KOZUMPLÍK, J., KOLÁŘ, R., JAN, J. Číslicové zpracování signálů v prostředí Matlab. Číslicové zpracování signálů v prostředí Matlab. Brno: VUT v Brně, FEI, Ústav biomedicínského inženýrství, 2001. ISBN: 80-214-1964- 4.
    Detail

    HRUBÝ, R., HOLČÍK, J., KOZUMPLÍK, J., KOLÁŘ, R. Wavelet Based Filtering of Myopotentials in Equine ECG. In SYMBIOSIS 2001. Proc. VI. Intern. Conference. Szczyrk, Poland: Szczyrk, Poland, 2001. p. 223 ( p.)ISBN: 121- 829X.
    Detail

  • 2000

    KOLÁŘ, R., KOZUMPLÍK, J. Methods for ultrasound attenuation estimation in tissues. In Analysis of biomedical signals and images. Brno: VUTIUM PRESS, 2000. p. 389 ( p.)ISBN: 80-214-1610- 6.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Wavelet based Wiener denoising with edge enhancement of radiofrequency signal. In Analysis of biomedical signals and images. Brno: VUTIUM PRESS, 2000. p. 392 ( p.)ISBN: 80-214-1610- 6.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Předzpracování ultrazvukových dat pomocí fuzzy entropie. Sborník abstrakt Kongres MEFA 2000. Brno: BVV Brno, 2000.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Optimální prahování ultrazvukových dat s využitím fuzzy entropie. In Matlab 2000. Praha: VŠCHT Praha, 2000. p. 162 ( p.)ISBN: 80-7080-401- 7.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Contrast enhancement of ultrasound images via wavelet transform. In Sborník prací studentů a doktorandů FEI VUT. Brno: FEI VUT Brno, 2000. p. 61 ( p.)ISBN: 80-7204-155- X.
    Detail

    KOLÁŘ, R., KOZUMPLÍK, J. Wavelet based Wiener denoising with edge enhancement of radiofrequency signal. In Radioelektronika 2000. Brno: Vydavateľstvo STU Bratislava, 2000. p. P- 15 ( p.)ISBN: 80-227-1389- 9.
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