Publications

• 2023

  VITOUŠ, J.; JIŘÍK, R.; STRAČINA, T.; HENDRYCH, M.; NÁDENÍČEK, J.; MACÍČEK, O.; TIAN, Y.; KRÁTKÁ, L.; DRAŽANOVÁ, E.; NOVÁKOVÁ, M.; BABULA, P.; PANOVSKÝ, R.; DIBELLA, E.; STARČUK, Z. T1 mapping of myocardium in rats using self-gated golden-angle acquisition. MAGNETIC RESONANCE IN MEDICINE, 2023, vol. 91, no. 1, p. 368-380. ISSN: 0740-3194.
  Detail | WWW | Full text in the Digital Library

  MÉZL, M.; JIŘÍK, R. Výuka zobrazovacích systémů na Ústavu biomedicínského inženýrství FEKT VUT v Brně. Brno: VUT v Brně, Fakulta elektrotechniky a komunikačních technologií, 2023.
  Detail | WWW

• 2019

  BARTOŠ, M.; RAJMIC, P.; ŠOREL, M.; MANGOVÁ, M.; KEUNEN, O.; JIŘÍK, R. Spatially regularized estimation of the tissue homogeneity model parameters in DCE-MRI using proximal minimization. Magnetic Resonance in Medicine, 2019, vol. 82, no. 6, p. 2257-2272. ISSN: 1522-2594.
  Detail | WWW

  WALNER, H.; BARTOŠ, M.; MANGOVÁ, M.; KEUNEN, O.; BJERKVIG, R.; JIŘÍK, R.; ŠOREL, M. Iterative Methods for Fast Reconstruction of Undersampled Dynamic Contrast-Enhanced MRI Data. In World Congress on Medical Physics and Biomedical Engineering 2018. 2019. p. 267-271. ISBN: 978-981-10-9035-6.
  Detail | WWW

• 2018

  MACÍČEK, O.; ANDERSEN, E.; ANGENETE, O.; AUGDAL, T.; ROSENDAHL, K.; JIŘÍK, R.; GRÜNER, R. Evaluation of dynamic DCE-MRI of the temporomandibular joint. Joint Annual Meeting ISMRM-ESMRMB 2018. Paris, France: 2018. p. 2180-2180.
  Detail | WWW

  ENGJOM, T.; NYLUND, K.; ERCHINGER, F.; STANGELAND, M.; LAERUM, B.; MÉZL, M.; JIŘÍK, R.; GILJA, O.; DIMCEVSKI, G. Contrast-enhanced ultrasonography of the pancreas shows impaired perfusion in pancreas insufficient cystic fibrosis patients. BMC Medical Imaging, 2018, vol. 18, no. 14, p. 1-8. ISSN: 1471-2342.
  Detail | WWW

  BARTOŠ, M.; ŠOREL, M.; MANGOVÁ, M.; RAJMIC, P.; STANDARA, M.; JIŘÍK, R. DCE-MRI Perfusion Analysis with L1-Norm Spatial Regularization. Joint Annual Meeting ISMRM-ESMRMB 2018, Paris Expo Porte de Versailles, Paris, France, June 16--21. 2018. p. 1-3.
  Detail

  MACÍČEK, O.; JIŘÍK, R.; MIKULKA, J.; BARTOŠ, M.; ŠPRLÁKOVÁ, A.; KEŘKOVSKÝ, M.; STARČUK, Z.; BARTUŠEK, K.; TAXT, T. Time-Efficient Perfusion Imaging Using DCE- and DSC-MRI. Measurement Science Review, 2018, vol. 18, no. 6, p. 262-271. ISSN: 1335-8871.
  Detail | WWW

• 2017

  JIŘÍK, R.; DAŇKOVÁ, M.; RAJMIC, P.; KRÁTKÁ, L.; DVOŘÁKOVÁ, L.; DRAŽANOVÁ, E.; STARČUK, Z. Absolute Quantification of Brain Perfusion using Golden Angle Compressed Sensing DCE-MRI. ISMRM 2016, 25th Annual Meeting & Exhibition, Honolulu, HI, USA, April 22--27. 2017. p. 1 (1 s.).
  Detail

  KOVÁŘ, D.; HUBÁLEK, J.; FOHLEROVÁ, Z.; MALÁ, A.; KALINA, M.; JIŘÍK, R.; STARČUK, Z.; SKLÁDAL, P.; HLAVÁČEK, A. Preparation and Characterisation of Highly Stable Iron Oxide Nanoparticles for Magnetic Resonance Imaging. JOURNAL OF NANOMATERIALS, 2017, vol. 2017, no. 1, p. 1-8. ISSN: 1687-4110.
  Detail | WWW | Full text in the Digital Library

  MACÍČEK, O.; JIŘÍK, R.; STARČUK JR., Z. Joint DCE- and DSC-MRI processing using the Gradient correction model. ISMRM 2017 25th Annual Meeting & Exhibition. Honolulu, HI, USA: 2017. p. 136-136.
  Detail | WWW

  MANGOVÁ, M.; RAJMIC, P.; JIŘÍK, R. Dynamic Magnetic Resonance Imaging using Compressed Sensing with Multi-scale Low Rank Penalty. In Proceedings of the 40th International Conference on Telecommunications and Signal Processing (TSP) 2017. Barcelona: 2017. p. 780-783. ISBN: 978-1-5090-3981-4.
  Detail

  STANGELAND, M.; ENGJOM, T.; MÉZL, M.; JIŘÍK, R.; GILJA, O.; DIMCEVSKI, G.; NYLUND, K. Interobserver Variation of the Bolus-and-Burst Method for Pancreatic Perfusion with Dynamic – Contrast-Enhanced Ultrasound. Ultrasound International Open, 2017, vol. 3, no. 3, p. E99 (E106 p.)ISSN: 2199-7152.
  Detail | WWW

• 2016

  DVOŘÁKOVÁ, L.; JIŘÍK, R.; DRAŽANOVÁ, E.; SCHEER, P.; HLOŽKOVÁ, J.; PANOVSKÝ, R.; STARČUK, Z. Retrospetive-Gating Myocardial T1 Mapping in Rats with Doxoru- bicin Cardiomyopathy. Proceedings of the 22th Conference STUDENT EEICT 2016. 2016. p. 548-552. ISBN: 978-80-214-5350-0.
  Detail | WWW

  JIŘÍK, R.; TAXT, T.; SOUČEK, K.; KRATOCHVÍLA, J.; MACÍČEK, O.; DRAŽANOVÁ, E.; STARČUK, Z. Comparison of the ATH and 2CXM models using low- and high-molecular-weight contrast agents in DCE-MRI. In MAGMA. MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE. 2016. p. 447-448. ISSN: 1352-8661.
  Detail

  KRATOCHVÍLA, J.; JIŘÍK, R.; STARČUK, Z.; BARTOŠ, M.; STANDARA, M.; TAXT, T. Using multichannel blind AIF estimation with the DCATH model to allow increased temporal sampling interval in DCE-MRI. In Magma. MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE. 29. Magn Reson Mater Phy, 2016. p. 288-289. ISSN: 1352-8661.
  Detail

  MÉZL, M.; JIŘÍK, R.; DVOŘÁKOVÁ, L.; DRAŽANOVÁ, E.; KOLÁŘ, R. Comparison of Arterial Input Function Models for Small-Animal Ultrasound Perfusion Imaging. In Proceedings of 2016 IEEE International Ultrasonics Symposium. Tours, Francie: IEEE Ultrasonics, Ferroelectrics, and Frequency Control Society, 2016. p. 1-4. ISBN: 978-1-4673-9897-8.
  Detail | WWW

• 2015

  JIŘÍK, R.; KRATOCHVÍLA, J.; BARTOŠ, M.; SOUČEK, K.; DRAŽANOVÁ, E.; GROSSOVÁ, L.; MACÍČEK, O.; TAXT, T.; STARČUK, Z. Evaluation of blind deconvolution in DCE- MRI using multiple contrast agents. In MedViz Conference 2015 - Innovation in Imaging & Visualization. Bergen: 2015. p. 28-33. ISBN: 978-82-998920-5- 6.
  Detail

  MÉZL, M.; JIŘÍK, R.; HARABIŠ, V.; KOLÁŘ, R.; STANDARA, M.; NYLUND, K.; GILJA, O.; TAXT, T. Absolute ultrasound perfusion parameter quantification of a tissue-mimicking phantom using bolus tracking. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2015, vol. 62, no. 5, p. 983-987. ISSN: 0885-3010.
  Detail

  KRATOCHVÍLA, J.; JIŘÍK, R.; BARTOŠ, M.; STANDARA, M.; STARČUK, Z.; TAXT, T. Distributed capillary adiabatic tissue homogeneity model in parametric multi-channel blind AIF estimation using DCE-MRI. MAGNETIC RESONANCE IN MEDICINE, 2015, vol. -, no. -, p. 1-11. ISSN: 0740-3194.
  Detail | WWW

  STANGELAND, M.; ENGJOM, T.; MÉZL, M.; JIŘÍK, R.; GILJA, O.; DIMCEVSKI, G.; NYLUND, K. An inter-observer study of the bolus-and-burst method for analysing pancreatic perfusion by contrast- enhanced ultrasound. In MedViz Conference 2015 - Innovation in Imaging & Visualization. Bergen: 2015. p. 81-85. ISBN: 978-82-998920-5- 6.
  Detail

  DAŇKOVÁ, M.; RAJMIC, P.; JIŘÍK, R. Acceleration of Perfusion MRI Using Locally Low-Rank Plus Sparse Model. In Latent Variable Analysis and Signal Separation. Liberec: Springer, 2015. p. 514-521. ISBN: 978-3-319-22481-7.
  Detail

  MÉZL, M.; JIŘÍK, R.; SOUČEK, K.; KOLÁŘ, R. Evaluation of Accuracy of Bolus and Burst Method for Quantitative Ultrasound Perfusion Analysis with Various Arterial Input Function Models. In Proceedings on IEEE International Ultrasonics Symposium 2015. 2015. p. 1-4. ISBN: 978-1-4799-8182-3.
  Detail

  GROSSOVÁ, L.; JIŘÍK, R.; SOUČEK, K.; DRAŽANOVÁ, E.; STARČUK, Z. Comparison of ASL and DCE- MRI Perfusion Map in Small Animal Model of Cancer. In 10th International Conference on Measurement. 2015. p. 160-163. ISBN: 978-80-969672-9- 2.
  Detail

  MALÁ, A.; BAKANDRITSOS, A.; MACÍČEK, O.; DRAŽANOVÁ, E.; JIŘÍK, R.; DVOŘÁKOVÁ, L.; GROSSOVÁ, L.; STARČUK, Z. Evaluation of a Novel Maghemite Hybrid Nanocarrier for MR Imaging (Pilot Study). In Measurement 2015. Proceedings of the 10th Internacional Conference on Measurement. 2015. p. 121-124. ISBN: 978-80-969672-9- 2.
  Detail

  DVOŘÁKOVÁ, L.; JIŘÍK, R.; BURIAN, M.; HEJČL, A.; STARČUK, Z. In Vivo Diffusion Tensor Imaging of the Rat Spinal Cord - Pilot Study. In Measurement 2015. Proceedings of the 10th Internacional Conference on Measurement. 2015. p. 129-132. ISBN: 978-80-969672-9- 2.
  Detail

  MÉZL, M.; JIŘÍK, R. Srovnání optimalizačních algoritmů pro ultrazvukovou perfúzní analýzu metodou bolus and burst. In Sborník příspěvků Technical Computing Prague 2015. Praha: 2015. p. 39-44. ISBN: 978-80-7080-936- 5.
  Detail | WWW

• 2014

  JIŘÍK, R.; SOUČEK, K.; MÉZL, M.; BARTOŠ, M.; DRAŽANOVÁ, E.; DRÁFI, F.; GROSSOVÁ, L.; KRATOCHVÍLA, J.; MACÍČEK, O.; NYLUND, K.; HAMPL, A.; GILJA, O.; TAXT, T.; STARČUK, Z. Blind Deconvolution in Dynamic Contrast- Enhanced MRI and Ultrasound. In 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. 2014. p. 4276-4279. ISBN: 978-1-4244-7929- 0.
  Detail

  JIŘÍK, R.; SOUČEK, K.; DRAŽANOVÁ, E.; GROSSOVÁ, L.; STANDARA, M.; KRATOCHVÍLA, J.; MACÍČEK, O.; MALÁ, A.; TAXT, T.; STARČUK, Z. Blind Mulitchannel Deconvolution for Estimation of a Parametric AIF in DCE-MRI of Mice. Proceedings of the International Society for Magnetic Resonance in Medicine 2014. Milano: 2014. p. 2754-2754.
  Detail

  MACÍČEK, O.; JIŘÍK, R.; STANDARA, M.; BARTOŠ, M.; BARTUŠEK, K. Zpracování dat v MRI perfusní analýze. In Nové směry v biomedicínském inženýrství. Brno: Vysoké učení technické v Brně, Ústav biomedicínského inženýrství, 616 00 Brno, Technická 12, 2014. p. 47-54. ISBN: 978-80-214-5049- 3.
  Detail

  SCHÄFER, S.; NYLUND, K.; SAVIK, F.; ENGJOM, T.; MÉZL, M.; JIŘÍK, R.; DIMCEVSKI, G.; GILJA, O.; TÖNNIES, K. Semi-automatic motion compensation of contrast-enhanced ultrasound images from abdominal organs for perfusion analysis. COMPUTERS IN BIOLOGY AND MEDICINE, 2014, vol. -, no. -, p. 1-9. ISSN: 0010-4825.
  Detail | WWW

  BARTOŠ, M.; JIŘÍK, R.; KRATOCHVÍLA, J.; STANDARA, M.; STARČUK, Z.; TAXT, T. The Precision of DCE-MRI Using the Tissue Homogeneity Model with Continuous Formulation of the Perfusion Parameters. MAGNETIC RESONANCE IMAGING, 2014, vol. 32, no. 5, p. 505-513. ISSN: 0730-725X.
  Detail

• 2013

  JIŘÍK, R.; NYLUND, K.; TAXT, T.; MÉZL, M.; HAUSKEN, T.; HARABIŠ, V.; KOLÁŘ, R.; STANDARA, M.; GILJA, O. Parametric Ultrasound Perfusion Analysis Parametric Ultrasound Perfusion Analysis Combining Bolus Tracking and Replenishment. In 2012 IEEE International Ultrasonics Symposium Proceedings. 2013. p. 1323-1326. ISBN: 978-1-4577-1253- 1.
  Detail

  SLÁVIK, V.; KOLÁŘ, R.; HARABIŠ, V.; JIŘÍK, R. Rician inverse Gaussian model of scattering in ultrasound contrast media. In 2013 IEEE International Ultrasonics Symposium Proceedings. 2013. p. 318-321. ISBN: 978-1-4673-5684- 8.
  Detail

  HARABIŠ, V.; KOLÁŘ, R.; MÉZL, M.; JIŘÍK, R. Comparison and evaluation of indicator dilution models for bolus of ultrasound contrast agents. PHYSIOLOGICAL MEASUREMENT, 2013, vol. 34, no. 2, p. 151-162. ISSN: 0967- 3334.
  Detail

  GROSSOVÁ, L.; JIŘÍK, R.; STARČUK, Z. Akvizice MRI obrazových sekvencí pro preklinické perfusní zobrazování. In Zborník konferencie Trendy v biomedicínskom inžinierstve 2013. 2013. p. 173-176. ISBN: 978-80-8086-208-4.
  Detail

  DAŇKOVÁ, M.; RAJMIC, P.; JIŘÍK, R. Komprimované snímání perfúzního zobrazování v MRI. In Nové směry v biomedicínském inženýrství. Brno: Společnost elektrotechnického inženýrství, 2013. p. 63-70. ISBN: 978-80-214-4814- 8.
  Detail | Full text in the Digital Library

  KOVÁŘ, D.; FOHLEROVÁ, Z.; MALÁ, A.; JIŘÍK, R.; STARČUK, Z.; KALINA, M.; SKLÁDAL, P. The Synthesis, Surface Modification and Stability of SPIO Nanoparticles for MRI Application. Nanocon 2013 - Conference proceedings. 1. Brno: TANGER Ltd., 2013. p. 113-113. ISBN: 978-80-87294-44- 4.
  Detail

  MÉZL, M.; JIŘÍK, R.; MATRE, K.; DAHLE, G.; GRONG, K.; SALMINEN, P.; LONNEBAKKEN, M.; TAXT, T. Quantitative myocardial perfusion analysis with contrast-enhanced ultrasound bolus tracking - preliminary animal results. In IEEE International Ultrasonics Symposium 2013, Prague. 2013. p. 541-544. ISBN: 978-1-4673-5684- 8.
  Detail

  NYLUND, K.; JIŘÍK, R.; MÉZL, M.; LEH, S.; HAUSKEN, T.; PFEFFER, F.; ODEGAARD, S.; TAXT, T.; GILJA, O. Quantitative Contrast-Enhanced Ultrasound Comparison Between Inflammatory and Fibrotic Lesions in Patients with Crohn' s Disease. ULTRASOUND IN MEDICINE AND BIOLOGY, 2013, vol. 39, no. 7, p. 1197-1206. ISSN: 0301- 5629.
  Detail

  JIŘÍK, R.; NYLUND, K.; GILJA, O.; MÉZL, M.; HARABIŠ, V.; KOLÁŘ, R.; STANDARA, M.; TAXT, T. Ultrasound perfusion analysis combining bolus-tracking and burst- replenishment. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2013, vol. 60, no. 2, p. 310-319. ISSN: 0885- 3010.
  Detail

  SLÁVIK, V.; KOLÁŘ, R.; HARABIŠ, V.; JIŘÍK, R. Application of Nakagami Distributions in Ultrasound Contrast Imaging. In Measurement 2013 Proceedings. Slovakia: VEDA, 2013. p. 117-120. ISBN: 978-80-969672-5- 4.
  Detail

  MÉZL, M.; JIŘÍK, R.; HARABIŠ, V. Akvizice a zpracování dat v ultrazvukové perfúzní analýze. In Nové směry v biomedidínském inženýrství. Brno: 2013. p. 44-51. ISBN: 978-80-214-4814- 8.
  Detail

  MACÍČEK, O.; JIŘÍK, R.; BARTOŠ, M.; ŠPRLÁKOVÁ, A.; KEŘKOVSKÝ, M.; TAXT, T.; BARTUŠEK, K.; STARČUK, Z. Interleaved DCE and DSC- MRI. In Trendy v biomedicínskom inžinierstve / Trendy v biomedicínském inženýrství 2013. Podbanské, Vysoké tatry, Slovenská republika: Technická univerzita v Košiciach, 2013. p. 177-180. ISBN: 978-80-8086-208- 4.
  Detail

• 2012

  JIŘÍK, R.; PETERLÍK, I.; RUITER, N.; FOUSEK, J.; DAPP, R.; ZAPF, M.; JAN, J. Sound-Speed Image Reconstruction in Sparse- Aperture 3D Ultrasound Transmission Tomography. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2012, vol. 2012, no. 2, p. 254-264. ISSN: 0885- 3010.
  Detail

  KOLÁŘ, R.; JIŘÍK, R.; HARABIŠ, V. Nakagami model of scattering in ultrasound contrast media. In Proceedings of the IEEE International Ultrasonics Symposium 2012, Dresden. 2012. p. 410-412. ISBN: 978-1-4577-1253- 1.
  Detail

  FOUSEK, J.; JIŘÍK, R.; RUITER, N.; JAN, J. FAST 3D SIMULATION FOR ULTRASOUND TRANSMISSION TOMOGRAPHY. In Proc. of IEEE- IWSSIP 2012 Vienna. Vienna (A): TU Wien, 2012. p. 602-605. ISBN: 978-3-200-02588- 2.
  Detail

  TAXT, T.; JIŘÍK, R.; RYGH, C.; GRÜNER, R.; BARTOŠ, M.; ANDERSEN, E.; CURRY, F.; REED, R. Single-channel blind estimation of arterial input function and tissue impulse response in DCE-MRI. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2012, vol. 59, no. 4, p. 1012-1021. ISSN: 0018- 9294.
  Detail

  KRATOCHVÍLA, J.; JIŘÍK, R.; STANDARA, M.; BARTOŠ, M.; STARČUK, Z.; TAXT, T. Blind Parametric Multi-Channel Deconvolution for Estimation of Arterial Input Function in Dynamic Contrast-Enhanced MRI. In MAGMA – Magnetic Resonance Materials in Physics, Biology and Medicine. Springer Berlin / Heidelberg, 2012. p. 228-229. ISSN: 0968-5243.
  Detail

• 2011

  MÉZL, M.; JIŘÍK, R. Soubor softwarových nástrojů pro ultrazvukové perfuzní zobrazování. In Sborník mezinárodní konference Technical Computing Prague 2011. Praha: 2011. p. 1-3. ISBN: 978-80-7080-794- 1.
  Detail

  HARABIŠ, V.; KOLÁŘ, R.; JIŘÍK, R. Registration of Ultrasound Image Sequences for Perfusion Analysis. In 19th European Signal Processing Conference (EUSIPCO-2011). 18th European Signal Processing Conference (EUSIPCO-2010). EURASIP. Barcelona: EURASIP, 2011. p. 1015-1019. ISBN: 978-3-642-03882- 2. ISSN: 2076- 1465.
  Detail

  BARTOŠ, M.; JIŘÍK, R.; KEUNEN, O.; TAXT, T. Adaptive Filtering of Dynamic Contrast Enhanced Magnetic Resonance Images. In Abstract Book. Bergen: University of Bergen, 2011. p. 88-88. ISBN: 978-82-993786-6- 6.
  Detail

  MÉZL, M.; JIŘÍK, R.; BARTOŠ, M.; HARABIŠ, V.; KRATOCHVÍLA, J.; KOLÁŘ, R. Software Package for Dynamic Contrast- Enhanced Ultrasound Imaging. In Abstract Book - 2011 Joint National Ph.D. Conference in Medical Imaging and MedViz Conference. Bergen, Norway: University of Bergen, 2011. p. 120-121. ISBN: 978-82-993786-6- 6.
  Detail

• 2010

  KEUNEN, O.; TAXT, T.; BARTOŠ, M.; JIŘÍK, R.; THORSEN, F.; JOHANSSON, M.; OUDIN, A.; SANZEY, M.; ABDULRAHIM, S.; FACK, F.; BJERKVIG, R.; NICLOU, S. Multi-modal imaging and pharmacokinetic modeling shed light on mechanism of action of anti- angiogenic therapy in malignant gliomas. Methods and Applications in Bioinformatics: From ideas to results. 2010. p. 3-4.
  Detail | WWW

  KOLÁŘ, R.; HARABIŠ, V.; JIŘÍK, R. Registration of Ultrasound Contrast Images for Perfusion Analysis. In Proceedings of International Ultrasonics Symposium 2009. 2010. p. 1251-1254. ISBN: 978-1-4244-4390- 1.
  Detail

  KOLÁŘ, R.; JIŘÍK, R.; HARABIŠ, V.; MÉZL, M.; BARTOŠ, M. Advanced Methods for Perfusion Analysis in Echocardiography. Physiological Research, 2010, vol. 59, no. S1, p. S33 (S41 p.)ISSN: 1802- 9973.
  Detail

  KOLÁŘ, R.; JIŘÍK, R.; HARABIŠ, V.; MÉZL, M.; BARTOŠ, M. Advanced Methods for Perfusion Analysis in Echocardiography. Physiological Research, 2010, vol. 59, no. Suppl 1, p. S33 (S41 p.)ISSN: 0862- 8408.
  Detail

  MÉZL, M.; JIŘÍK, R.; HARABIŠ, V.; KOLÁŘ, R. Quantitative Ultrasound Perfusion Analysis In Vitro. In Proceedings of Biosignal 2010: Analysis of Biomedical Signals and Images. Analysis of Biomedical Signals and Images. Brno University of Technology, 2010. p. 279-283. ISBN: 978-80-214-4106- 4. ISSN: 1211- 412X.
  Detail

  HARABIŠ, V.; KOLÁŘ, R.; JIŘÍK, R.; MÉZL, M. Perfusion Curves Modelling For Evaluating Of Ultrasound Image Registration. In Proceedings of Biosignal 2010: Analysis of Biomedical Signals and Images. Analysis of Biomedical Signals and Images. Brno University of Technology, 2010. p. 333-340. ISBN: 978-80-214-4106- 4. ISSN: 1211- 412X.
  Detail

• 2009

  JIŘÍK, R.; PETERLÍK, I.; JAN, J.; RUITER, N.; ZAPF, M. 3D Regularized Speed-Map Reconstruction in Ultrasound Transmission Tomography. Abstracts of 2009 IEEE International Ultrasonics Symposium, Roma. IEEE, 2009.
  Detail

• 2008

  JIŘÍK, R.; TAXT, T. Two- Dimmensional Blind Bayesian Deconvolution of Medical Ultrasound Images. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2008, vol. 55, no. 10, p. 2140-2153. ISSN: 0885- 3010.
  Detail

  PETERLÍK, I.; JIŘÍK, R.; JAN, J.; RUITER, N. Ultrasound Attenuation Transmission Tomography Using Regularized Image Reconstruction. Analysis of Biomedical Signals and Images, 2008, vol. 2008(19), no. 1, p. 251-254. ISSN: 1211- 412X.
  Detail

  PETERLÍK, I.; JIŘÍK, R.; RUITER, N.; JAN, J. Regularized Image Reconstruction for Ultrasound Attenuation Transmission Tomography. Radioengineering, 2008, vol. 12, no. 2, p. 125-132. ISSN: 1210- 2512.
  Detail

  FILIPÍK, A.; JAN, J.; PETERLÍK, I.; HEMZAL, D.; RUITER, N.; JIŘÍK, R. Modified Time-of- Flight Calibration Approach for Ultrasonic Computed Tomography. Abstracts of Contributions, 4th Int. Workshop DAR. Praha: ÚTIA Praha, 2008. p. 45-45.
  Detail

  FILIPÍK, A.; JAN, J.; PETERLÍK, I.; HEMZAL, D.; RUITER, N.; JIŘÍK, R. Modified Time-of- Flight Based Calibration Approach for Ultrasonic Computed Tomography. In Proceedings 30th Int. Conf. IEEE- EMBS. IEEE. Vancouver: IEEE - EMBS, 2008. p. 2101-2104. ISBN: 978-1-4244-1815- 2.
  Detail

  BARTOŠ, M.; JIŘÍK, R.; HARABIŠ, V.; KOLÁŘ, R. Measurement of SonoVue TM Properties for Quantitative Contrast Ultrasonic Imaging. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 22-22. ISSN: 1211- 412X.
  Detail

  BARTOŠ, M.; JIŘÍK, R. Comparison of non-blind and blind deconvolution by the richardson- lucy algorithm in MR perfusion. Analysis of Biomedical Signals and Images, 2008, vol. 19, no. 1, p. 47-48. ISSN: 1211- 412X.
  Detail

• 2007

  JIŘÍK, R.; PETERLÍK, I.; JAN, J.; HEMZAL, D.; RUITER, N.; STOTZKA, R. Attenuation Imaging Using Ultrasound Transmission Tomography. In Abstracts of Contributions to 3rd International Workshop on Data - Algorithms - Decision Making. Liblice, Česká Republika: DAR ÚTIA Praha, 2007. p. 49-49.
  Detail

  JIŘÍK, R.; JAN, J.; PETERLÍK, I.; HEMZAL, D.; FILIPÍK, A.; ZAČAL, J.; ROLEČEK, J.; KOLÁŘ, R. Ultrasound Transmission Tomography. In Sborník 7. česko- slovenské konference Trendy v biomedicínském inženýrství. Kladno, Česká republika: ČVUT, FBMI, 2007. p. 208-211. ISBN: 978-80-01-03777- 5.
  Detail

  JIŘÍK, R.; TAXT, T. Homomorphic Deconvolution of Ultrasonic Images. In Ultrasonic and Advanced Methods for Nondestructive Testing and Material Characterization. 1. Singapore: World Scientific, 2007. p. 559-590. ISBN: 978- 9812704092.
  Detail

  FILIPÍK, A.; JAN, J.; PETERLÍK, I.; HEMZAL, D.; JIŘÍK, R. Calibration of an Ultrasonic Computed Tomography System. In Abstracts of Contributions to 3rd International Workshop on Data-Algorithms-Decision Making, Liblice 2007. UTIA AVČR. Praha: ÚTIA AVČR, 2007. p. 16-16.
  Detail

  ZAČAL, J.; HEMZAL, D.; JAN, J.; DĚDEK, L.; JIŘÍK, R. Simulation checks in ultrasonic computed tomography. In Proceedings of the 29th IEEE-EMBS conference, Lyon 2007. IEEE EMBS. Lyon: IEEE - EMBS, 2007. p. 731-734. ISBN: 1-4244-0788- 5.
  Detail

  FILIPÍK, A.; PETERLÍK, I.; HEMZAL, D.; JAN, J.; JIŘÍK, R. Calibrating an Ultrasonic Compted Tomography System using a Time-of- Flight based Positionaing Algorithm. In Proc. of 29th IEEE-EMBS conference, Lyon 2007. IEEE- EMBS. Lyon: IEEE EMBS, 2007. p. 2146-2149. ISBN: 1-4244-0788- 5.
  Detail

  JAN, J.; KOLÁŘ, R.; JIŘÍK, R. Organisational Aspects of the EVICAB - a Virtual European Campus for Biomedical Engineering. In The Moving Frontiers of Engineering - Proceedings of Intern. conference on Engineering Education (abstracts) - ICEE 2007 , Coimbra. iNEER. Coimbra: iNEER, 2007. p. 105-109. ISBN: 978-972-8055-14- 1.
  Detail

  KOLÁŘ, R.; JAN, J.; JIŘÍK, R. Semiautomatic Detection and Evaluation of Autofluorescent Areas in Retinal Images. In Sborník konference 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. 2007. p. 3327-3330.
  Detail

• 2006

  R. Jiřík, I. Peterlík, J. Jan, J. Začal, R. Kolář, N. Ruiter, R. Stotzka. Reconstruction of Attenuation Images in Ultrasound Transmission Tomography. In Abstracts of Contributions to 2nd International Workshop on Data - Algorithms - Decision Making. Třešť, Česká Republika: DAR ÚTIA Praha, 2006. p. 48 ( p.)
  Detail

  PETERLÍK, I.; JIŘÍK, R.; RUITER, N.; STOTZKA, R.; JAN, J.; KOLÁŘ, R. Ultrasound Transmission Tomography Using Algebraic Reconstruction Techniques. In Abstracts of Contributions to 2nd International Workshop on Data - Algorithms - Decision Making. Praha: UTIA, AV ČR, 2006. p. 34 ( p.)
  Detail

  JIŘÍK, R.; PETERLÍK, I.; ZAČAL, J.; JAN, J.; RUITER, N.; STOTZKA, R.; KOLÁŘ, R.; KUBEČKA, L. Attenuation Imaging in Ultrasound Transmission Tomography. In Proceedings of 18th Int. EURASIP Conf. BIOSIGNAL 2006. Brno, Česká republika: VUTIUM Press, 2006. p. 233 ( p.)ISBN: 80-214-3152- 0.
  Detail

  Kubecka L, Kolar R, Jan J, Jirik R. Retrospective Illumination Correction of Retinal Images. In Proceedings of 17th International EURASIP Conference BIOSIGNAL 2004. Brno: 2006. p. 257 ( p.)
  Detail

  Kolář R, Kubečka L, Flusser J, Jan J, Jiřík R. Noise Suppression In Retinal Autofluorescence Images. In Analysis of Biomedical Signals and Images. Brno: VUTIUM Press, 2006. p. 302 ( p.)ISBN: 80-214-3152- 0.
  Detail

  Kolář R, Kubečka L, Jan J, Jiřík R. Image Improvement in Confocal Scanning Laser Ophthalmoscopy. In Analysis of Biomedical Signals and Images. Brno: VUTIUM Press, 2006. p. 239 ( p.)ISBN: 80-214-3152- 0.
  Detail

  Kolář R, Jiřík R, Začal J, Jonáková M, Jan J. 3D Ultrasound Point Spread Function Measurement and Evaluation. In Analysis of Biomedical Signals and Images. Brno: VUTIUM Press, 2006. p. 305 ( p.)ISBN: 80-214-3152- 0.
  Detail

  Zacal J, Hemzal D, Jan J, Filipik A, Jirik R, Kolar R. Comparison of Wave-Equation Versus Measurement- Processing Transducer Calibration for Ultrasonic Transmission Tomography. In Proceedings of 28th Annual International Conference IEEE EMBS. New York (USA): 2006. p. 2754 ( p.)ISBN: 14244-0033- 3.
  Detail

  ZAČAL, J., HEMZAL, D., JAN, J., FILIPÍK, A., JIŘÍK, R., KOLÁŘ, R. Comparison of Wave-Equation Based Versus Measurement- Processing Based Transducer Calibration for Ultrasonic Transmission Tomography. In Abstracts of Contributions to 2nd International Workshop on Data – Algorithms – Decision Making. ÚTIA 2006/ 32. Praha: ÚTIA AV ČR, 2006. p. 50 ( p.)
  Detail

  KOLÁŘ, R., JAN, J., LAEMMER, R., MARDIN, CH.Y., JIŘÍK, R., ZAČAL, J., FILIPÍK, A., PETERLÍK, I. Analysis of Retinal Autofluorescence Images for Early Glaucoma Diagnosis. In Abstracts of Contributions to 2nd International Workshop on Data - Algorithms - Decision Making. Česká Republika: DAR ÚTIA Praha, 2006. p. 35 ( p.)
  Detail

  KOLÁŘ, R., JAN, J., KUBĚNA, T., ČERNOŠEK, P., JIŘÍK, R., ZAČAL, J., FILIPÍK, A., PETERLÍK, I. Properties of the Retinal Nerve Fiber Layer via Color Fundus Images. In Abstracts of Contributions to 2nd International Workshop on Data - Algorithms - Decision Making. Česká Republika: DAR ÚTIA Praha, 2006. p. 52 ( p.)
  Detail

  KUBEČKA, L.; JAN, J.; KOLÁŘ, R.; JIŘÍK, R. Elastic Registration for Auto- fluorescence Image Averaging. In Proc. 28th IEEE/EMBS Ann.Intern. Conf. 2006. New York: IEEE, 2006. p. 1948 ( p.)ISBN: 1-4244-0033- 3.
  Detail

  J.Jan, R.Kolar,R.Jirik, A.Filipik,L.Kubečka,I.Peterlik,J. Zacal. Overview of Biomedical Image Processing Activities of Brno Group of the DAR. In Abstracts of 2nd Int. Workshop on Data-Algorithms- Decision making. Praha: UTIA AVČR Praha, 2006. p. 1 ( p.)
  Detail

  Kubecka L., Jan J., Kolar R., Jirik R. IMPROVING QUALITY OF AUTOFLUORESCENCE IMAGES USING NON- RIGID IMAGE REGISTRATION. In Proc. 14th European Signal Processing Conf. EUSIPCO 2006. 1. Florence (Italy): Univ. of Pisa, 2006. p. 357 ( p.)
  Detail

  Igor Peterlík, Radovan Jiřík, Nicole Ruiter, Rainer Stotzka, Jiří Jan Radim Kolář. Algebraic Reconstruction Technique for Ultrasound Transmission Tomography. In Proceedings of International Conference ITAB 2006. Ioannina, Řecko: The University of Ioannina, 2006. p. 1 ( p.)
  Detail

  A.Filipík, J.Jan, R. Jiřík. Calibration of a Transmission Ultrasound Computed Tomography System. In Abstracts of 2nd Int. Workshop on Data-Algorithms- Decision making. Třešť: UTIA AVČR Praha, 2006. p. 45 ( p.)
  Detail

  JIŘÍK, R.; TAXT, T. High-Resolution Ultrasonic Imaging Using Fast Two- Dimensional Homomorphic Filtering. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2006, vol. 53, no. 8, p. 1440 ( p.)ISSN: 0885- 3010.
  Detail

• 2005

  Radovan Jiřík, Torfinn Taxt. BLIND ITERATIVE DECONVOLUTION OF ULTRASONIC IMAGES. In EMBEC 2005 Conference Proceedings. IFMBE Proceedings. Praha: IFMBE, 2005. p. 0 ( p.)ISSN: 1727- 1983.
  Detail

  JIŘÍK, R.; TAXT, T. Two- dimensional blind iterative deconvolution of medical ultrasound images. In Proceedings of 2004 IEEE Ultrasonics Symposium. Piscataway, USA: IEEE UFFC, 2005. p. 1262-1265. ISBN: 0-7803-8413- X.
  Detail

  JIŘÍK, R.; STOTZKA, R.; TAXT, T. Ultrasonic Attenuation Tomography Based on Log- Spectrum Analysis. In Medical Imaging 2005, Ultrasonic Imaging and Signal Processing. Vol. 6. USA: SPIE, 2005. p. 305-314. ISBN: 0-8194-5724- 8.
  Detail

  Radovan Jiřík, Igor Peterlík, Jiří Jan, Nicole Ruiter, Rainer Stotzka, Radim Kolář, Libor Kubečka, Jiří Začal. Model of Radiofrequency Data Acquisition in Ultrasound Transmission Tomography. In Abstracts of Contributions to International Workshop on Data - Algorithms - Decision Making. Praha: DAR UTIA AV ČR, 2005. p. 1 ( p.)
  Detail

  Začal J, Jan J, Jiřík J, Kolář J, Kubečka L, Peterlík I. Deploying a Campus Grid: Experience With The Condor Distributed Batch System. In International Workshop on Data - Algorithms - Decision Making. Praha: UTIA - Academy of Science of Czech Republic, 2005. p. 1 ( p.)
  Detail

  Jan, J., Jiřík, R., Kolář, R., Filipík, A., Kubečka, L. Selected Problems of Medical Image Data Processing (vyžádaný referát). In 2. společná konference. Praha: UTIA AVČR Praha, 2005. p. 1 ( p.)
  Detail

  Filipík, A., Jan, J., Jiřík, R., Ruiter, N., Stotzka, R. Transducer Calibration in Transmission Ultrasound Tomography. In IFMBE Proceedings (EMBEC). IFMBE Proceedings Vol.11, 2005. Praha: IFMBE, 2005. p. 450 ( p.)
  Detail

  Kubecka L., Jan J., Kolar R., Jirik R. Non-Rigid Registration of Time Series of Auto- Fluorescent HRA 2D Images. In Abstracts of Contributions to International Workshop on Data - Algorithms - Decision Making. 41. Praha: UTIA, Czech Academy of Sciencies, 2005. p. 3 ( p.)
  Detail | WWW

• 2004

  TAXT, T.; JIŘÍK, R. Superresolution of Ultrasound Images Using the 1st and 2nd Harmonic Signal. IEEE Transactions on Ultrasonocs, Ferroelectrics, and Frequency Control, 2004, vol. 51, no. 2, p. 163 ( p.)ISSN: 0885- 3010.
  Detail

  KOLÁŘ, R., JIŘÍK, R., JAN, J. Estimator Comparison of the Nakagami- m Parameter and its Application in Echocardiography. Radioengineering, 2004, vol. 13, no. 1, p. 8-12. ISSN: 1210- 2512.
  Detail

  JIŘÍK, R.; TAXT, T.; JAN, J. Ultrasound Attenuation Imaging. Journal of Electrical Engineering, 2004, vol. 55, no. 7- 8, p. 180 ( p.)ISSN: 1335- 3632.
  Detail

  JIŘÍK, R.; TAXT, T.; JAN, J. Estimation of ultrasound attenuation coefficient using log- spectrum domain processing. In Proceedings of the 26th Annual Int. Conf. of the IEEE EMBS. USA: IEEE inc., 2004. p. 1411 ( p.)ISBN: 0-7803-8440- 7.
  Detail

  JIŘÍK, R., JAN, J. Imaging of Ultrasound Attenuation Coefficient. Technology and Health Care, Int. Journal of Health Care Engineering, 2004, vol. 12, no. 2, p. 172 ( p.)ISSN: 0928- 7329.
  Detail

  JIŘÍK, R. Restoration of Ultrasound Images Using the 1st and 2nd Harmonic Signal. In Analysis of Biomedical Signals and Images, Proceedings of 17th Int. EURASIP Conf. BIOSIGNAL 2004. Brno, Czech rep.: VUTIM Press, 2004. p. 252 ( p.)ISBN: 80-214-2633- 0.
  Detail

  JIŘÍK, R., JAN, J. Restoration and Analysis of Ultrasonic Images. Brno: 2004. p. 1 ( p.)
  Detail

  JIŘÍK, R., JAN, J. Estimation of Ultrasound Attenuation Coefficient. In Analysis of Biomedical Signals and Images, Proceedings of 17th Int. EURASIP Conf. BIOSIGNAL 2004. Brno: VUTIM Brno, 2004. p. 258 ( p.)ISBN: 80-214-2633- 0.
  Detail

  KOLÁŘ, R., JIŘÍK, R. Nakagami- m Distribution In Echocardiography. In Analysis of Biomedical Signals and Images. Brno: Brno University of Technology, 2004. p. 343 ( p.)ISBN: 80-214-2633- 0.
  Detail

• 2003

  JIŘÍK, R.; TAXT, T.; JAN, J. Imaging of Ultrasound Attenuation Coefficient. In Abstracts of ESEM- ESAO Conference 2003. Halle, Germany: 2003. p. 188 ( p.)
  Detail

• 2002

  JIŘÍK, R., JAN, J. Spatial Resolution Enhancement in Ultrasonography by 2D Formalised Restoration. In Analysis of Biomedical Signals and Images 16th EURASIP internat. conf. BIOSIGNAL proceedings. Brno: VUTIUM Press Brno, 2002. p. 365 ( p.)ISBN: 80-214-2120- 7.
  Detail

• 2001

  JIŘÍK, R., JAN, J. 2D Homomorphic Approach to Deconvolution of Ultrasonograms. In Proceedings of 7th conference Student FEI 2001. Papers written by postgraduate students, Volume 2. Brno: 2001. p. 229 ( p.)ISBN: 80-214-1860- 5.
  Detail

  JIŘÍK, R., JAN, J. Restoration of Ultrasound Images Using 2D Homomorphic Filtering. In Proc.11th Int. Conf. Radioelektronika 2001. 1. Brno: 2001. p. 210 ( p.)ISBN: 80-214-1861- 3.
  Detail

  JIŘÍK, R., JAN, J. IMPROVEMENT OF SPATIAL RESOLUTION IN ULTRASOUND IMAGES USING 2D HOMOMORPHIC FILTERING. In Proceedings of VI. Int. Conf. SYMBIOSIS 2001. 1. Sczyrk, Poland: Silesian TU Gliwice, 2001. p. 57 ( p.)ISBN: 80-214-0893- 6.
  Detail

• 2000

  JIŘÍK, R., JAN, J. Restaurace ultrazvukových dat s využitím kepstrální analýzy. In Sborník abstrakt, kongres MEFA 2000. Brno: 2000. p. 0 ( p.)
  Detail

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