Brno University of Technology - Vnitřní projekty VUT

- whole funder (2020-01-01 - 2021-12-31)

FIT-S-20-6293

Czech

Bartík Vladimír, Ing., Ph.D. - fellow researcher
Beníčková Zuzana, Ing. - fellow researcher
Burget Radek, doc. Ing., Ph.D. - fellow researcher
Burgetová Ivana, Ing., Ph.D. - fellow researcher
Dvořák Tomáš, Ing. - fellow researcher
Grégr Matěj, Ing., Ph.D. - fellow researcher
Grofčík Peter, Ing. - fellow researcher
Hon Jiří, Ing., Ph.D. - fellow researcher
Hranický Radek, Ing., Ph.D. - fellow researcher
Hruška Tomáš, prof. Ing., CSc. - fellow researcher
Hynek Jiří, Ing., Ph.D. - fellow researcher
Imeri Arbnor, M.Eng., MSc - fellow researcher
Jeřábek Kamil, Ing., Ph.D. - fellow researcher
Klobučníková Dominika, Ing. - fellow researcher
Kocman Radim, Ing., Ph.D. - fellow researcher
Kolář Dušan, doc. Dr. Ing. - fellow researcher
Koutenský Michal, Ing. - fellow researcher
Kövári Adam, Mgr. - fellow researcher
Krajč Patrik, Ing. - fellow researcher
Kreslíková Jitka, doc. RNDr., CSc. - fellow researcher
Křivka Zbyněk, Ing., Ph.D. - fellow researcher
Květoňová Šárka, Ing., Ph.D. - fellow researcher
Masárová Mária, Ing. - fellow researcher
Meduna Alexandr, prof. RNDr., CSc. - fellow researcher
Musil Miloš, Ing., Ph.D. - fellow researcher
Pastushenko Olena, Ing. - fellow researcher
Polčák Libor, Ing., Ph.D. - fellow researcher
Pristaš Ján, Ing. - fellow researcher
Regéciová Dominika, Ing. - fellow researcher
Rudnitckaia Julia, Mgr., Ph.D. - fellow researcher
Rychlý Marek, RNDr., Ph.D. - fellow researcher
Ryšavý Ondřej, doc. Ing., Ph.D. - fellow researcher
Škarvada Libor, RNDr. - fellow researcher
Tomko Martin, Ing. - fellow researcher
Večeřa Vojtěch, Ing. - fellow researcher
Veselý Vladimír, Ing., Ph.D. - fellow researcher
Victor Malombe - fellow researcher
Vondráček Martin, Ing. - fellow researcher
Youssef Sawsan, Ing. - fellow researcher
Zendulka Jaroslav, doc. Ing., CSc. - fellow researcher
Zobal Lukáš, Ing. - fellow researcher
Matoušek Petr, doc. Ing., Ph.D., M.A. - principal person responsible

Department of Information Systems
- internal (2020-01-01 - 2022-12-31)
Faculty of Information Technology
- beneficiary (2020-01-01 - 2022-12-31)

HOLKOVIČ, M.; RYŠAVÝ, O. Using Rule-Based Decision Trees for Automatic Passive Diagnostics of the Network Problems. International Journal on Advances in Networks and Services, 2020, vol. 2020, no. 1, p. 1-10. ISSN: 1942-2644.
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HOLKOVIČ, M.; BOHUŠ, M.; RYŠAVÝ, O. Pattern Detection Based Network Diagnostics. In Proceedings of the 17th International Joint Conference on e-Business and Telecommunications. Setubal: SciTePress - Science and Technology Publications, 2020. p. 35-42. ISBN: 978-989-758-445-9.
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HON, J.; BORKO, S.; ŠTOURAČ, J.; PROKOP, Z.; BEDNÁŘ, D.; ZENDULKA, J.; MARTÍNEK, T.; DAMBORSKÝ, J. EnzymeMiner: automated mining of soluble enzymes with diverse structures, catalytic properties and stabilities. Nucleic Acids Research, 2020, vol. 48, no. 1, p. 104-109. ISSN: 1362-4962.
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MUSIL, M.; KHAN, R.; BEIER, A.; ŠTOURAČ, J.; KONEGGER, H.; DAMBORSKÝ, J.; BEDNÁŘ, D. FireProtASR: Web Server for Fully Automated Ancestral Sequence Reconstruction. BRIEFINGS IN BIOINFORMATICS, 2020, vol. 22, no. 4, p. 1-11. ISSN: 1467-5463.
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ŠTOURAČ, J.; DÚBRAVA, J.; MUSIL, M.; HORÁČKOVÁ, J.; MAZURENKO, S.; DAMBORSKÝ, J.; BEDNÁŘ, D. FireProtDB: Database of Manually Curated Protein Stability Data. Nucleic Acids Research, 2020, vol. 49, no. 1, p. 319-324. ISSN: 1362-4962.
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MATOUŠEK, P.; RYŠAVÝ, O.; HAVLENA, V.; GRÉGR, M. Flow based monitoring of ICS communication in the smart grid. Journal of Information Security and Applications, 2020, vol. 2020, no. 54, p. 102535-102535. ISSN: 2214-2126.
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YOUSSEF, S.; RYŠAVÝ, O. Proposed Method for Partial Node Replacement by Software Defined Network. Position Papers of the 2020 Federated Conference on Computer Science and Information Systems. Annals of Computer Science and Information Systems. Warsaw: Polish Information Processing Society, 2020. p. 11-14. ISBN: 978-83-959183-0-8. ISSN: 2300-5963.
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MATOUŠEK, P.; BURGETOVÁ, I.; RYŠAVÝ, O.; VICTOR, M. On Reliability of JA3 Hashes for Fingerprinting Mobile Applications. In Digital Forensics and Cyber Crime. ICDF2C 2020. Lecture Notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering. Boston: Springer International Publishing, 2021. p. 1-22. ISBN: 978-3-030-68733-5.
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MATOUŠEK, P.; RYŠAVÝ, O. Teaching ICS Security in Blended Classroom Environment. In Proceedings of the 2021 30th Annual Conference of the European Association for Education in Electrical and Information Engineering (EAEEIE). Prague: Czech Technical University, 2021. p. 148-153. ISBN: 978-1-7281-9324-3.
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MATOUŠEK, P.; RYŠAVÝ, O.; POLČÁK, L. Unified SNMP Interface for IoT Monitoring. In Proceedings of the IM 2021 - 2021 IFIP/IEEE International Symposium on Integrated Network Management. Bordeaux: International Federation for Information Processing, 2021. p. 938-943. ISBN: 978-3-903176-32-4.
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KOLÁŘ, D.; MEDUNA, A.; TOMKO, M. Multi-Island Finite Automata and Their Even Computations. Kybernetika, 2022, vol. 57, no. 5, p. 856-877. ISSN: 0023-5954.
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Fully Automated Ancestral Sequence Reconstruction using FireProt-ASR Pipeline. 2020, p. 1-5.
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KHAN, R.; MUSIL, M.; ŠTOURAČ, J.; DAMBORSKÝ, J.; BEDNÁŘ, D. Fully Automated Ancestral Sequence Reconstruction using FireProtASR. Current Protocols in Bioinformatics, 2021, vol. 1, no. 2, p. 1-5. ISSN: 1934-3396.
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HON, J.; MARUŠIAK, M.; MARTÍNEK, T.; KUNKA, A.; ZENDULKA, J.; BEDNÁŘ, D.; DAMBORSKÝ, J. SoluProt: prediction of soluble protein expression in Escherichia coli. BIOINFORMATICS, 2021, vol. 37, no. 1, p. 23-28. ISSN: 1367-4803.
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HRANICKÝ, R. Forenzní analýza šifrovaných dat. DSM Data Security Management, 2020, roč. 2020, č. 4, s. 14-18. ISSN: 1211-8737.
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MATOUŠEK, P.; BURGETOVÁ, I.; VICTOR, M. Mobile Device Fingerprinting. FIT-TR-2020-05, Brno: 2020. p. 0-0.
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VICTOR, M. PC Browser and Android Applications Fingerprinting. Brno: 2020. p. 0-0.
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WACHIURI, S. Security Analysis of the GOOSE Communication Protocol Using Statistical Profiling. Brno: 2020. p. 0-0.
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MUTUA, N. Application of Approximate Matching on Industrial Control System (ICS) Network Communication Using Ssdeep Algorithm. Brno: 2020. p. 0-0.
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HAVLENA, V.; HOLÍK, L.; MATOUŠEK, P. Learning Probabilistic Automata in the Context of IEC 104. IT-TR-2020-01, Brno: Faculty of Information Technology BUT, 2020. p. 0-0.
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OLIVEIRA, W.; PASTUSHENKO, O.; RODRIGUES, L.; TODA, A.; PALOMINO, P.; HAMARI, J.; ISOTANI, S. Does gamification affect flow experience? A systematic literature review. In GamiFIN Conference 2021. GamiFIN Conference 2021. Tampere: Association for Computing Machinery, 2021. p. 110-119. ISBN: 979-000-000-6.
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PLANAS-IGLESIAS, J.; PINTO, G.; MARQUES, S.; MUSIL, M.; DAMBORSKÝ, J.; ŠTOURAČ, J.; BEDNÁŘ, D. Computational design of enzymes for biotechnological applications. BIOTECHNOLOGY ADVANCES, 2021, vol. 47, no. 1, p. 1-22. ISSN: 0734-9750.
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MATOUŠEK, P.; KRAJČ, P. Monitoring of IoT Devices Using SNMP. IT-TR-2020-10, Brno: Faculty of Information Technology BUT, 2021. p. 0-0.
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MATOUŠEK, P.; PRISTAŠ, J.; MASÁROVÁ, M. Simulation of Industrial Processes using I/O Factory and UniPi. IT-TR-2020-09, Brno: Faculty of Information Technology BUT, 2021. p. 0-0.
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REGÉCIOVÁ, D.; KOLÁŘ, D.; MILKOVIČ, M. Pattern Matching in YARA: Improved Aho-Corasick Algorithm. IEEE Access, 2021, vol. 9, no. 1, p. 62857-62866. ISSN: 2169-3536.
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BURGETOVÁ, I.; MATOUŠEK, P.; MUTUA, N. Statistical Methods for Anomaly Detection in Industrial Communication. IT-TR-2021-01, Brno: Faculty of Information Technology BUT, 2021. p. 0-0.
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POLČÁK, L. CVE-2021-34571, CVE-2021-34572, CVE-2021-34573, CVE-2021-34576. Frankfurt am Main: 2021. p. 0-0.
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HRANICKÝ, R.; BREITINGER, F.; RYŠAVÝ, O.; SHEPPARD, J.; SCHAEDLER, F.; MORGENSTERN, H.; MALIK, S. What do incident response practitioners need to know? A skillmap for the years ahead. Forensic Science International: Digital Investigation, 2021, vol. 37, no. 2, p. 23-34. ISSN: 2666-2825.
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MATOUŠEK, P.; GROFČÍK, P. ICS Virtual Testbed. FIT-TR-2021-02, Brno: Faculty of Information Technology BUT, 2021. p. 0-0.
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KÖVÁRI, A.; KŘIVKA, Z.; MEDUNA, A. Evaluating Yona Language. In INTERNATIONAL CONFERENCES ON WWW/INTERNET 2021 AND APPLIED COMPUTING 2021. Lisabon: International Association for Development of the Information Society, 2021. p. 101-108. ISBN: 978-989-8704-34-4.
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MUTUA, N.; MATOUŠEK, P. Outlier Detection in Smart Grid Communication. Fast Abstracts and Student Forum Proceedings, 17th European Dependable Computing Conference. Munich: 2021. p. 1-4.
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HOLKOVIČ, M.; BOHUŠ, M.; RYŠAVÝ, O. Network Problem Diagnostics using Typographic Error Correction. In Proceedings of the 17th International Conference on Network Service Management (CNSM 2021). Izmir: Institute of Electrical and Electronics Engineers, 2021. p. 482-490. ISBN: 978-3-903176-36-2.
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MATOUŠEK, P. Bezpečnostní rizika IoT. Brno: 2021. s. 1-12.
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VESELÝ, V.; ZAVŘEL, J. Enhanced Interior Gateway Routing Protocol. Budapešť: 2020. p. 0-17.
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VESELÝ, V.; ZAVŘEL, J. Quality Control Methodology for Simulation Models of Computer Network Protocols. Proceedings of 8th Virutal OMNeT++ Community Summit. Ithaca, NY: Cornell University Library, 2021. p. 1-19. ISSN: 2331-8422.
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MATOUŠEK, P. Security of Smart Grid Communication. Brno: Faculty of Information Technology BUT, 2021. p. 0-0.
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RUDNITCKAIA, J.; VENKATASCHALAM, H.; ESSMANN, R.; HRUŠKA, T.; COLOMBO, A. Screening Process Mining and Value Stream Techniques on Industrial Manufacturing Processes: Process Modelling and Bottleneck Analysis. IEEE Access, 2022, vol. 2022, no. 10, p. 24203-24214. ISSN: 2169-3536.
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OLIVEIRA, W.; ISOTANI, S.; PASTUSHENKO, O.; HAMARI, J.; HRUŠKA, T. Modeling students' flow experience through data logs in gamified educational systems. In Proceedings - IEEE 21st International Conference on Advanced Learning Technologies, ICALT 2021. online: IEEE Communications Society, 2021. p. 97-101. ISBN: 978-1-6654-4106-3.
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POLČÁK, L.; MATOUŠEK, P. Metering Homes: Do Energy Efficiency and Privacy Need to be in Conflict?. In Proceedings of the 19th International Conference on Security and Cryptography. Lisabon: SciTePress - Science and Technology Publications, 2022. p. 47-58. ISBN: 978-989-758-590-6.
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JEŘÁBEK, K.; RYŠAVÝ, O.; BURGETOVÁ, I. Measurement and characterization of DNS over HTTPS traffic. 2022, vol. 2022, no. 2204, p. 1-27. ISSN: 2331-8422.
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ZÁMOCKÝ, M.; MUSIL, M.; BANCHENKO, M.; FERIANC, P.; CHOVANOVÁ, K.; BARÁTH, P.; POLJOVKA, A.; BEDNÁŘ, D. Deep Insights into the Specific Evolution of Fungal Hybrid B Heme Peroxidases. Biology, 2022, vol. 11, no. 3, p. 1-18. ISSN: 2079-7737.
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JEŘÁBEK, K.; HYNEK, K.; ČEJKA, T.; RYŠAVÝ, O. Collection of Datasets with DNS over HTTPS Traffic. Data in Brief (Online), 2022, vol. 2022, no. 42, p. 1-13. ISSN: 2352-3409.
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OLIVEIRA, W.; TENORIO, K.; HAMARI, J.; PASTUSHENKO, O.; ISOTANI, S. Predicting students' flow experience through behavior data in gamified educational systems. Smart Learning Environments, 2021, vol. 8, no. 1, p. 1-18. ISSN: 2196-7091.
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HAMMER, J.; KŘIVKA, Z. Practical Aspects of Membership Problem of Watson-Crick Context-free Grammars. In Proceedings 12th International Workshop on Non-Classical Models of Automata and Applications. Electronic Proceedings in Theoretical Computer Science, EPTCS. Debrecen: School of Computer Science and Engineering, University of New South Wales, 2022. p. 88-111. ISSN: 2075-2180.
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KLOBUČNÍKOVÁ, D.; KŘIVKA, Z.; MEDUNA, A. Conclusive Tree-Controlled Grammars. In Proceedings 12th International Workshop on Non-Classical Models of Automata and Applications. Electronic Proceedings in Theoretical Computer Science, EPTCS. Debrecen: School of Computer Science and Engineering, University of New South Wales, 2022. p. 112-125. ISSN: 2075-2180.
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POLČÁK, L. Responsible And Safe Home Metering: How to Design A Privacy-Friendly Metering System?. In Information Security and Privacy in Smart Devices: Tools, Methods, and Applications. Information Security and Privacy in Smart Devices: Tools, Methods, and Applications. Hershey, PA: IGI Global, 2023. p. 1-40. ISBN: 978-1-6684-5991-1.
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MUSIL, M.; JEŽÍK, A.; HAMŠÍKOVÁ, M.; ŠTOURAČ, J.; GALGONEK, J.; EYRILMEZ, S.; VONDRÁŠEK, J.; DAMBORSKÝ, J.; BEDNÁŘ, D. Fully automated virtual screening pipeline of FDA-approved drugs using Caver Web. Computational and Structural Biotechnology Journal, 2022, vol. 20, no. 1, p. 6512-6518. ISSN: 2001-0370.
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VELECKÝ, J.; HAMŠÍKOVÁ, M.; ŠTOURAČ, J.; MUSIL, M.; DAMBORSKÝ, J.; BEDNÁŘ, D.; MAZURENKO, S. SoluProtMutDB: A manually curated database of protein solubility changes upon mutations. Computational and Structural Biotechnology Journal, 2022, vol. 20, no. 1, p. 6339-6347. ISSN: 2001-0370.
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PASTUSHENKO, O.; PASSMORE, C. Play and Resistance: Intersecting Identities and Implicit Biases in Gamified Educational Tools. In Extended Abstracts of the 2023 CHI Conference on Human Factors in Computing Systems. Hamburg: Association for Computing Machinery, 2023. p. 1-7. ISBN: 978-1-4503-9422-2.
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VONDRÁČEK, M.; BAGGILI, I.; CASEY, P.; MEKNI, M. Rise of the Metaverse's Immersive Virtual Reality Malware and the Man-in-the-Room Attack & Defenses. COMPUTERS & SECURITY, 2023, vol. 127, no. 1, p. 1-13. ISSN: 0167-4048.
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BORKO, S.; HON, J.; BEDNÁŘ, D.; DAMBORSKÝ, J.; MARTÍNEK, T.; PROKOP, Z.; ŠTOURAČ, J.; ZENDULKA, J.: EnzymeMiner; EnzymeMiner: automated mining of soluble enzymes with diverse structures, catalytic properties and stabilities. https://loschmidt.chemi.muni.cz/enzymeminer/. URL: https://loschmidt.chemi.muni.cz/enzymeminer/. (software)
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MALÝ, V.; HYNEK, J.: geovisto-hierarchy; Geovisto: Hierarchy Tool. Github: https://github.com/geovisto/geovisto-hierarchy npm: https://www.npmjs.com/package/geovisto-hierarchy. URL: https://www.fit.vut.cz/research/product/767/. (software)
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SLÁMOVÁ, H.: CSD-Dataset; Dataset of smart devices communication. Datová sada je ke stažení na: https://ieee-dataport.org/documents/communication-smart-devices-0. URL: https://www.fit.vut.cz/research/product/690/. (software)
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ŠTOURAČ, J.; DÚBRAVA, J.; MUSIL, M.; HORÁČKOVÁ, J.; BEDNÁŘ, D.; DAMBORSKÝ, J.; MAZURENKO, S.: FireProtDB; FireProtDB. Databáze je zdarma dostupná na https://loschmidt.chemi.muni.cz/fireprotdb.. URL: https://www.fit.vut.cz/research/product/662/. (software)
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BURGET, R.: OwlDocGen; OwlDocGen ontology documentation generator. https://github.com/radkovo/OwlDocGen. URL: https://github.com/radkovo/OwlDocGen. (software)
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JEŘÁBEK, K.; STUCHLÝ, S.: DoH-dataset; DNS over HTTPS network traffic dataset. Datová sada je ke stažení na: https://ieee-dataport.org/documents/dns-over-https-network-traffic. URL: https://www.fit.vut.cz/research/product/696/. (software)
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HRANICKÝ, R.; POLČÁK, L.: SensorAPI-JSR-Wrappers; Anti-fingerprinting Generic Sensor API Wrappers for JSRestrictor. https://github.com/ihranicky/jsrestrictor. URL: https://github.com/ihranicky/jsrestrictor. (software)
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BEDNÁŘ, M.; SCHAUER, M.: WebCrawler; Analyzer of JavaScript calls on web pages. https://polcak.github.io/jsrestrictor-dev/blogarticles/crawling_results.html. URL: https://polcak.github.io/jsrestrictor-dev/blogarticles/crawling_results.html. (software)
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MATOUŠEK, P.; RYŠAVÝ, O.: FACTORY20; MODBUS Dataset for ICS Anomaly Detection. Datová sada je ke stažení na: https://ieee-dataport.org/documents/modbus-dataset-ics-anomaly-detection. URL: https://www.fit.vut.cz/research/product/707/. (software)
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BURGET, R.: FitLayoutWebClient; FitLayout Web Client. https://github.com/FitLayout/PageView. URL: https://github.com/FitLayout/PageView. (software)
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MATOUŠEK, P.; RYŠAVÝ, O.; GROFČÍK, P.: ICS-dataset; ICS Dataset for Smart Grid Anomaly Detection. Datová sada je k dispozici na https://ieee-dataport.org/documents/ics-dataset-smart-grid-anomaly-detection.. URL: https://www.fit.vut.cz/research/product/714/. (software)
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HON, J.; MARUŠIAK, M.; MARTÍNEK, T.; KUNKA, A.; ZENDULKA, J.; BEDNÁŘ, D.; DAMBORSKÝ, J.: SoluProt; SoluProt: prediction of soluble protein expression in Escherichia coli. https://loschmidt.chemi.muni.cz/soluprot/. URL: https://loschmidt.chemi.muni.cz/soluprot/. (software)
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VESELÝ, V.; ZAVŘEL, J.: INET 4: BGP. Integrováno do INET 4 frameworku, viz https://github.com/inet-framework/inet/pull/. URL: https://www.fit.vut.cz/research/product/725/. (software)
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HRANICKÝ, R.; POLIŠENSKÝ, J.; HORÁK, A.: DomainRadar; DomainRadar - Detector of Malicious Domains (prototype). Aplikace je ke stažení v přiložených souborech.. URL: https://www.fit.vut.cz/research/product/742/. (software)
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BURGET, R.: FitLayoutPDF; PDF Renderer for FitLayout. https://github.com/FitLayout/FitLayout/tree/main/fitlayout-render-pdf. URL: https://github.com/FitLayout/FitLayout/tree/main/fitlayout-render-pdf. (software)
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VELECKÝ, J.; HAMŠÍKOVÁ, M.; ŠTOURAČ, J.; MUSIL, M.; DAMBORSKÝ, J.; BEDNÁŘ, D.; MAZURENKO, S.: SoluProtMutDB; SoluProtMutDB. Databáze je zdarma dostupná na https://loschmidt.chemi.muni.cz/soluprotmutdb/.. URL: https://www.fit.vut.cz/research/product/764/. (software)
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VESELÝ, V.; ZAVŘEL, J.: INET 4: EIGRP; INET 4: EIGRP. Integrováno do INET 4 frameworku, viz https://github.com/inet-framework/inet/pull/570. URL: https://www.fit.vut.cz/research/product/684/. (software)
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